RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 NEXNQ0ZGT2 675 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 BEND3Q5T5X7 828 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
PDAP1-203ENST00000488214 ZBTB1Q9Y2K1 713 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 UBR3Q6ZT12 1888 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 ALDH1L1O75891 902 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 GNAI3P08754 354 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 UBTFL1P0CB47 393 aaPredicted RBP8.68□□□□□ -1.02
PDAP1-203ENST00000488214 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
PDAP1-203ENST00000488214 CWF19L2Q2TBE0 894 aaKnown RBP8.68□□□□□ -1.02
PDAP1-203ENST00000488214 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 TTLL7Q6ZT98 887 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 KRT27Q7Z3Y8 459 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
PDAP1-203ENST00000488214 MYD88Q99836 296 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 TUBGCP6Q96RT7 1819 aa8.68□□□□□ -1.02
PDAP1-203ENST00000488214 GNAI2P04899 355 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 HDAC1Q13547 482 aaPredicted RBP8.67□□□□□ -1.02
PDAP1-203ENST00000488214 ITPK1Q13572 414 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 ANKRD13DQ6ZTN6 518 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 SKAP1Q86WV1 359 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 PLBD2Q8NHP8 589 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 METTL22Q9BUU2 404 aaPredicted RBP8.67□□□□□ -1.02
PDAP1-203ENST00000488214 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
PDAP1-203ENST00000488214 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
PDAP1-203ENST00000488214 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 COL15A1P39059 1388 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 RXRBP28702 533 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
PDAP1-203ENST00000488214 CEP85Q6P2H3 762 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 NPM2Q86SE8 214 aaKnown RBP8.66□□□□□ -1.02
PDAP1-203ENST00000488214 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 ARXQ96QS3 562 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
PDAP1-203ENST00000488214 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
PDAP1-203ENST00000488214 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 ATP5J2-PTCD1G3V325 749 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 GRM8O00222 908 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 HMMRO75330 724 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 IGKV5-2P06315 115 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 RGS3P49796 1198 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
PDAP1-203ENST00000488214 CCNL1Q9UK58 526 aaPredicted RBP8.65□□□□□ -1.02
PDAP1-203ENST00000488214 DDX60Q8IY21 1712 aaKnown RBP8.65□□□□□ -1.03
PDAP1-203ENST00000488214 IBTKQ9P2D0 1353 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-203ENST00000488214 MAP3K15Q6ZN16 1313 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 CNTNAP4Q9C0A0 1308 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 NBPF7P0C2Y1 421 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-203ENST00000488214 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-203ENST00000488214 KCNQ4P56696 695 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 SIRT2Q8IXJ6 389 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-203ENST00000488214 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-203ENST00000488214 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
PDAP1-203ENST00000488214 EP400Q96L91 3159 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 TRIM37O94972 964 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 GCKRQ14397 625 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 INTS5Q6P9B9 1019 aaKnown RBP8.63□□□□□ -1.03
PDAP1-203ENST00000488214 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
PDAP1-203ENST00000488214 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
PDAP1-203ENST00000488214 CWC25Q9NXE8 425 aaPredicted RBP8.63□□□□□ -1.03
PDAP1-203ENST00000488214 RGS17Q9UGC6 210 aaPredicted RBP8.63□□□□□ -1.03
PDAP1-203ENST00000488214 UTYO14607 1347 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 APBB1O00213 710 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 GNPATO15228 680 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 GCC1Q96CN9 775 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 TBC1D2BQ9UPU7 963 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 HDAC5Q9UQL6 1122 aa8.62□□□□□ -1.03
PDAP1-203ENST00000488214 A0A087WZG4 1122 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 GPTP24298 496 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
PDAP1-203ENST00000488214 HLFQ16534 295 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 HSP90AB3PQ58FF7 597 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
PDAP1-203ENST00000488214 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
PDAP1-203ENST00000488214 ZBTB47Q9UFB7 747 aaPredicted RBP8.61□□□□□ -1.03
PDAP1-203ENST00000488214 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
PDAP1-203ENST00000488214 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 ATP8B2P98198 1209 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 NUCB1Q02818 461 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 TCIRG1Q13488 830 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
PDAP1-203ENST00000488214 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
PDAP1-203ENST00000488214 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
PDAP1-203ENST00000488214 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms