RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 BOLA2Q9H3K6 86 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
HSPG2-211ENST00000486901 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
HSPG2-211ENST00000486901 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.78□□□□□ -0.04
HSPG2-211ENST00000486901 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 BICD2Q8TD16 824 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
HSPG2-211ENST00000486901 ANAPC15P60006 121 aa14.77□□□□□ -0.04
HSPG2-211ENST00000486901 LGR6Q9HBX8 967 aa14.77□□□□□ -0.04
HSPG2-211ENST00000486901 TPCN1Q9ULQ1 816 aa14.77□□□□□ -0.04
HSPG2-211ENST00000486901 RAD50Q92878 1312 aa14.77□□□□□ -0.04
HSPG2-211ENST00000486901 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 ST3GAL1Q11201 340 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
HSPG2-211ENST00000486901 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 PRAMEF22A3QJZ6 481 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-211ENST00000486901 FAM184AQ8NB25 1140 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 KIAA1524Q8TCG1 905 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 PODXL2Q9NZ53 605 aa14.77□□□□□ -0.05
HSPG2-211ENST00000486901 AACSQ86V21 672 aa14.76□□□□□ -0.05
HSPG2-211ENST00000486901 SMAP1Q8IYB5 467 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-211ENST00000486901 TTC14Q96N46 770 aa14.76□□□□□ -0.05
HSPG2-211ENST00000486901 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
HSPG2-211ENST00000486901 JAK2O60674 1132 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 NUP62CLQ9H1M0 184 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 TNMDQ9H2S6 317 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 CYP46A1Q9Y6A2 500 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 CRB1P82279 1406 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 IFIT2P09913 472 aaKnown RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 HMGN5P82970 282 aaKnown RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 TYRO3Q06418 890 aa14.75□□□□□ -0.05
HSPG2-211ENST00000486901 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 TLR7Q9NYK1 1049 aaKnown RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-211ENST00000486901 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 SLFNL1Q499Z3 407 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 PRIMPOLQ96LW4 560 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 KIAA0232Q92628 1395 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 ZBTB22O15209 634 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 ZNF771Q7L3S4 317 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-211ENST00000486901 RBM8AQ9Y5S9 174 aaKnown RBP14.74□□□□□ -0.05
HSPG2-211ENST00000486901 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-211ENST00000486901 CBX8Q9HC52 389 aa14.74□□□□□ -0.05
HSPG2-211ENST00000486901 NR1I2O75469 434 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 TNNT1P13805 278 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 CPSF1Q10570 1443 aaKnown RBP14.73□□□□□ -0.05
HSPG2-211ENST00000486901 MAP3K11Q16584 847 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
HSPG2-211ENST00000486901 MTERF4Q7Z6M4 381 aaKnown RBP14.73□□□□□ -0.05
HSPG2-211ENST00000486901 KIF1BPQ96EK5 621 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 SPATA32Q96LK8 384 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 UVSSAQ2YD98 709 aa14.73□□□□□ -0.05
HSPG2-211ENST00000486901 CLASRPQ8N2M8 674 aaKnown RBP14.73□□□□□ -0.05
HSPG2-211ENST00000486901 USP27XA6NNY8 438 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
HSPG2-211ENST00000486901 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 FGD1P98174 961 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 DMTNQ08495 405 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 CCDC129Q6ZRS4 1044 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 FMNL2Q96PY5 1086 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 ATP6V1DQ9Y5K8 247 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 RIMS1Q86UR5 1692 aaKnown RBP14.72□□□□□ -0.05
HSPG2-211ENST00000486901 PTPN21Q16825 1174 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 CCDC144BQ3MJ40 725 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 CCDC144CPQ8IYA2 1237 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 FUCA2Q9BTY2 467 aa14.72□□□□□ -0.05
HSPG2-211ENST00000486901 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
HSPG2-211ENST00000486901 KRT85P78386 507 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 TRERF1Q96PN7 1200 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 FSD1Q9BTV5 496 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 ATP7BP35670 1465 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 ARHGAP31Q2M1Z3 1444 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 USP16Q9Y5T5 823 aa14.71□□□□□ -0.05
HSPG2-211ENST00000486901 ROBO2Q9HCK4 1378 aa14.71□□□□□ -0.06
HSPG2-211ENST00000486901 A0A0D9SFI3 127 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 CREB3L3Q68CJ9 461 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 RAB11FIP4Q86YS3 637 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 CGNQ9P2M7 1197 aaKnown RBP14.7□□□□□ -0.06
HSPG2-211ENST00000486901 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 SETD1BQ9UPS6 1966 aaKnown RBP14.7□□□□□ -0.06
HSPG2-211ENST00000486901 ERICH4A6NGS2 130 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 ZNF165P49910 485 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 CACTINQ8WUQ7 758 aaKnown RBP14.7□□□□□ -0.06
HSPG2-211ENST00000486901 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
HSPG2-211ENST00000486901 KIF20BQ96Q89 1820 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms