RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZNF280CQ8ND82 737 aa8.85□□□□□ -0.99
COPS3-209ENST00000486810 RHPN1Q8TCX5 695 aa8.85□□□□□ -0.99
COPS3-209ENST00000486810 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
COPS3-209ENST00000486810 SCNN1AP37088 669 aa8.84□□□□□ -0.99
COPS3-209ENST00000486810 LRRC69Q6ZNQ3 347 aa8.84□□□□□ -0.99
COPS3-209ENST00000486810 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
COPS3-209ENST00000486810 ABHD17AQ96GS6 310 aa8.84□□□□□ -0.99
COPS3-209ENST00000486810 CFHR5Q9BXR6 569 aa8.83□□□□□ -1
COPS3-209ENST00000486810 LRFN2Q9ULH4 789 aa8.83□□□□□ -1
COPS3-209ENST00000486810 BCS1LQ9Y276 419 aa8.83□□□□□ -1
COPS3-209ENST00000486810 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
COPS3-209ENST00000486810 ATP2B4P23634 1241 aa8.82□□□□□ -1
COPS3-209ENST00000486810 TNP2Q05952 138 aa8.82□□□□□ -1
COPS3-209ENST00000486810 SAMD5Q5TGI4 173 aa8.82□□□□□ -1
COPS3-209ENST00000486810 PHLDB3Q6NSJ2 640 aa8.82□□□□□ -1
COPS3-209ENST00000486810 SUSD3Q96L08 255 aa8.82□□□□□ -1
COPS3-209ENST00000486810 PCDHGC4Q9Y5F7 938 aa8.82□□□□□ -1
COPS3-209ENST00000486810 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
COPS3-209ENST00000486810 RTN1Q16799 776 aa8.81□□□□□ -1
COPS3-209ENST00000486810 RETREG2Q8NC44 543 aa8.81□□□□□ -1
COPS3-209ENST00000486810 MKNK1Q9BUB5 465 aa8.81□□□□□ -1
COPS3-209ENST00000486810 SAP130Q9H0E3 1048 aa8.81□□□□□ -1
COPS3-209ENST00000486810 STRN4Q9NRL3 753 aa8.81□□□□□ -1
COPS3-209ENST00000486810 DCDC2BA2VCK2 349 aa8.8□□□□□ -1
COPS3-209ENST00000486810 C2CD2LO14523 706 aa8.8□□□□□ -1
COPS3-209ENST00000486810 EFSO43281 561 aa8.8□□□□□ -1
COPS3-209ENST00000486810 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
COPS3-209ENST00000486810 SSFA2P28290 1259 aa8.8□□□□□ -1
COPS3-209ENST00000486810 CTBSQ01459 385 aa8.8□□□□□ -1
COPS3-209ENST00000486810 COX20Q5RI15 118 aa8.8□□□□□ -1
COPS3-209ENST00000486810 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
COPS3-209ENST00000486810 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
COPS3-209ENST00000486810 MYO19Q96H55 970 aa8.8□□□□□ -1
COPS3-209ENST00000486810 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
COPS3-209ENST00000486810 MBIPQ9NS73 344 aa8.8□□□□□ -1
COPS3-209ENST00000486810 KLK14Q9P0G3 267 aa8.8□□□□□ -1
COPS3-209ENST00000486810 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
COPS3-209ENST00000486810 FAM157BP0CG42 384 aa8.79□□□□□ -1
COPS3-209ENST00000486810 SLURP2P0DP57 97 aa8.79□□□□□ -1
COPS3-209ENST00000486810 GRIN2CQ14957 1233 aa8.79□□□□□ -1
COPS3-209ENST00000486810 FAM26DQ5JW98 314 aa8.79□□□□□ -1
COPS3-209ENST00000486810 COL26A1Q96A83 441 aa8.79□□□□□ -1
COPS3-209ENST00000486810 DMGDHQ9UI17 866 aaKnown RBP8.79□□□□□ -1
COPS3-209ENST00000486810 IGF1RP08069 1367 aa8.78□□□□□ -1
COPS3-209ENST00000486810 KHNYNO15037 678 aaKnown RBP8.78□□□□□ -1
COPS3-209ENST00000486810 FGFR3P22607 806 aa8.78□□□□□ -1
COPS3-209ENST00000486810 DGKZQ13574 1117 aa8.78□□□□□ -1
COPS3-209ENST00000486810 WHAMMQ8TF30 809 aa8.78□□□□□ -1
COPS3-209ENST00000486810 USTQ9Y2C2 406 aa8.78□□□□□ -1
COPS3-209ENST00000486810 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
COPS3-209ENST00000486810 ADAMTS2O95450 1211 aa8.77□□□□□ -1.01
COPS3-209ENST00000486810 MX2P20592 715 aa8.77□□□□□ -1.01
COPS3-209ENST00000486810 SRSF11Q05519 484 aaKnown RBP8.77□□□□□ -1.01
COPS3-209ENST00000486810 TYRO3Q06418 890 aa8.77□□□□□ -1.01
COPS3-209ENST00000486810 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1.01
COPS3-209ENST00000486810 VTI1AQ96AJ9 217 aa8.77□□□□□ -1.01
COPS3-209ENST00000486810 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
COPS3-209ENST00000486810 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
COPS3-209ENST00000486810 CD33P20138 364 aa8.76□□□□□ -1.01
COPS3-209ENST00000486810 GRNP28799 593 aaKnown RBP8.76□□□□□ -1.01
COPS3-209ENST00000486810 SFSWAPQ12872 951 aaKnown RBP8.76□□□□□ -1.01
COPS3-209ENST00000486810 PHF24Q9UPV7 400 aa8.76□□□□□ -1.01
COPS3-209ENST00000486810 TGFBR3LH3BV60 316 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 C11orf91Q3C1V1 193 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 IER5Q5VY09 327 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 BTLAQ7Z6A9 289 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 ANKIB1Q9P2G1 1089 aa8.75□□□□□ -1.01
COPS3-209ENST00000486810 ZNF385CQ66K41 422 aaPredicted RBP8.74□□□□□ -1.01
COPS3-209ENST00000486810 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
COPS3-209ENST00000486810 ACDQ96AP0 544 aa8.74□□□□□ -1.01
COPS3-209ENST00000486810 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
COPS3-209ENST00000486810 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
COPS3-209ENST00000486810 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
COPS3-209ENST00000486810 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
COPS3-209ENST00000486810 CEP63Q96MT8 703 aa8.73□□□□□ -1.01
COPS3-209ENST00000486810 BRD7Q9NPI1 651 aa8.73□□□□□ -1.01
COPS3-209ENST00000486810 KCNQ4P56696 695 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
COPS3-209ENST00000486810 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 C1orf229Q6ZS94 237 aaPredicted RBP8.72□□□□□ -1.01
COPS3-209ENST00000486810 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.01
COPS3-209ENST00000486810 MARK1Q9P0L2 795 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
COPS3-209ENST00000486810 OPLAHO14841 1288 aa8.71□□□□□ -1.02
COPS3-209ENST00000486810 BMP4P12644 408 aa8.71□□□□□ -1.02
COPS3-209ENST00000486810 INPP5BP32019 993 aa8.71□□□□□ -1.02
COPS3-209ENST00000486810 HIF1AQ16665 826 aa8.71□□□□□ -1.02
COPS3-209ENST00000486810 IFT43Q96FT9 208 aa8.71□□□□□ -1.02
COPS3-209ENST00000486810 MICAL2O94851 1124 aa8.7□□□□□ -1.02
COPS3-209ENST00000486810 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
COPS3-209ENST00000486810 IDH3AP50213 366 aa8.7□□□□□ -1.02
COPS3-209ENST00000486810 ZBTB39O15060 712 aa8.69□□□□□ -1.02
COPS3-209ENST00000486810 ARHGEF15O94989 841 aa8.69□□□□□ -1.02
COPS3-209ENST00000486810 MAP2K3P46734 347 aa8.69□□□□□ -1.02
COPS3-209ENST00000486810 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
COPS3-209ENST00000486810 KCNH4Q9UQ05 1017 aa8.69□□□□□ -1.02
COPS3-209ENST00000486810 USP20Q9Y2K6 914 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 390.2 ms