RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 DEFB115Q30KQ5 88 aa12.53□□□□□ -0.4
CCDC142-208ENST00000486335 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
CCDC142-208ENST00000486335 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
CCDC142-208ENST00000486335 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
CCDC142-208ENST00000486335 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
CCDC142-208ENST00000486335 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
CCDC142-208ENST00000486335 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
CCDC142-208ENST00000486335 A0A087WZG4 1122 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 FZD9O00144 591 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 KCNQ3O43525 872 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 EPHX2P34913 555 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
CCDC142-208ENST00000486335 STARD3NLO95772 234 aa12.51□□□□□ -0.41
CCDC142-208ENST00000486335 IL6STP40189 918 aaPredicted RBP12.51□□□□□ -0.41
CCDC142-208ENST00000486335 EAPPQ56P03 285 aaPredicted RBP12.51□□□□□ -0.41
CCDC142-208ENST00000486335 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
CCDC142-208ENST00000486335 HEG1Q9ULI3 1381 aa12.51□□□□□ -0.41
CCDC142-208ENST00000486335 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
CCDC142-208ENST00000486335 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC142-208ENST00000486335 CST9Q5W186 159 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 SCN4AP35499 1836 aa12.5□□□□□ -0.41
CCDC142-208ENST00000486335 CACNA1SQ13698 1873 aa12.49□□□□□ -0.41
CCDC142-208ENST00000486335 COL4A5P29400 1685 aa12.49□□□□□ -0.41
CCDC142-208ENST00000486335 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
CCDC142-208ENST00000486335 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
CCDC142-208ENST00000486335 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
CCDC142-208ENST00000486335 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC142-208ENST00000486335 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC142-208ENST00000486335 USP16Q9Y5T5 823 aa12.49□□□□□ -0.41
CCDC142-208ENST00000486335 CCDC85CA6NKD9 419 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 MAP2K1Q02750 393 aaPredicted RBP12.48□□□□□ -0.41
CCDC142-208ENST00000486335 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
CCDC142-208ENST00000486335 MLLT1Q03111 559 aaPredicted RBP12.47□□□□□ -0.41
CCDC142-208ENST00000486335 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
CCDC142-208ENST00000486335 CYP4F22Q6NT55 531 aa12.47□□□□□ -0.41
CCDC142-208ENST00000486335 SYNE4Q8N205 404 aa12.47□□□□□ -0.41
CCDC142-208ENST00000486335 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
CCDC142-208ENST00000486335 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
CCDC142-208ENST00000486335 TRAF5O00463 557 aa12.46□□□□□ -0.41
CCDC142-208ENST00000486335 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
CCDC142-208ENST00000486335 NPR1P16066 1061 aa12.46□□□□□ -0.41
CCDC142-208ENST00000486335 EPS15P42566 896 aa12.46□□□□□ -0.41
CCDC142-208ENST00000486335 SCNN1DP51172 638 aa12.46□□□□□ -0.41
CCDC142-208ENST00000486335 DZIP3Q86Y13 1208 aaKnown RBP12.46□□□□□ -0.41
CCDC142-208ENST00000486335 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
CCDC142-208ENST00000486335 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
CCDC142-208ENST00000486335 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 AOC2O75106 756 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
CCDC142-208ENST00000486335 ST5P78524 1137 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
CCDC142-208ENST00000486335 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
CCDC142-208ENST00000486335 GPC2Q8N158 579 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 GPR101Q96P66 508 aaPredicted RBP12.45□□□□□ -0.42
CCDC142-208ENST00000486335 ARFGEF2Q9Y6D5 1785 aa12.45□□□□□ -0.42
CCDC142-208ENST00000486335 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
CCDC142-208ENST00000486335 CLEC4GQ6UXB4 293 aa12.44□□□□□ -0.42
CCDC142-208ENST00000486335 RTKN2Q8IZC4 609 aa12.44□□□□□ -0.42
CCDC142-208ENST00000486335 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
CCDC142-208ENST00000486335 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
CCDC142-208ENST00000486335 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
CCDC142-208ENST00000486335 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
CCDC142-208ENST00000486335 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
CCDC142-208ENST00000486335 HLFQ16534 295 aa12.43□□□□□ -0.42
CCDC142-208ENST00000486335 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
CCDC142-208ENST00000486335 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
CCDC142-208ENST00000486335 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
CCDC142-208ENST00000486335 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
CCDC142-208ENST00000486335 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
CCDC142-208ENST00000486335 CRY2Q49AN0 593 aa12.42□□□□□ -0.42
CCDC142-208ENST00000486335 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
CCDC142-208ENST00000486335 ZIC5Q96T25 663 aa12.42□□□□□ -0.42
CCDC142-208ENST00000486335 PSMD1Q99460 953 aa12.42□□□□□ -0.42
CCDC142-208ENST00000486335 GNAT3A8MTJ3 354 aa12.41□□□□□ -0.42
CCDC142-208ENST00000486335 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
CCDC142-208ENST00000486335 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
CCDC142-208ENST00000486335 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
CCDC142-208ENST00000486335 COL3A1P02461 1466 aaPredicted RBP12.4□□□□□ -0.42
CCDC142-208ENST00000486335 MAP2K2P36507 400 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 TEFQ10587 303 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 NIP7Q9Y221 180 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC142-208ENST00000486335 BCORQ6W2J9 1755 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
CCDC142-208ENST00000486335 CASP8AP2Q9UKL3 1982 aa12.39□□□□□ -0.43
CCDC142-208ENST00000486335 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms