RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
SMARCC1-207ENST00000485833 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
SMARCC1-207ENST00000485833 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
SMARCC1-207ENST00000485833 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
SMARCC1-207ENST00000485833 CELA2BP08218 269 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 TNP2Q05952 138 aa9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
SMARCC1-207ENST00000485833 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 KHNYNO15037 678 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 BMP4P12644 408 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 WEE1P30291 646 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 SWI5Q1ZZU3 235 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 ALDH16A1Q8IZ83 802 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 ACDQ96AP0 544 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
SMARCC1-207ENST00000485833 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
SMARCC1-207ENST00000485833 CTBSQ01459 385 aa9.37□□□□□ -0.91
SMARCC1-207ENST00000485833 STK32AQ8WU08 396 aa9.37□□□□□ -0.91
SMARCC1-207ENST00000485833 C2CD2LO14523 706 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 EFSO43281 561 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 FOXO3O43524 673 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 FAM182BQ5T319 152 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 HSH2DQ96JZ2 352 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 ANKIB1Q9P2G1 1089 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
SMARCC1-207ENST00000485833 BCRP11274 1271 aa9.35□□□□□ -0.91
SMARCC1-207ENST00000485833 CD33P20138 364 aa9.35□□□□□ -0.91
SMARCC1-207ENST00000485833 LAMC2Q13753 1193 aa9.35□□□□□ -0.91
SMARCC1-207ENST00000485833 ADAMTS8Q9UP79 889 aa9.35□□□□□ -0.91
SMARCC1-207ENST00000485833 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 HIF1AQ16665 826 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 RTN1Q16799 776 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 TMEM164Q5U3C3 297 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 GDF2Q9UK05 429 aaPredicted RBP9.34□□□□□ -0.91
SMARCC1-207ENST00000485833 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
SMARCC1-207ENST00000485833 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
SMARCC1-207ENST00000485833 OIP5O43482 229 aa9.32□□□□□ -0.92
SMARCC1-207ENST00000485833 ARAFP10398 606 aa9.32□□□□□ -0.92
SMARCC1-207ENST00000485833 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
SMARCC1-207ENST00000485833 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
SMARCC1-207ENST00000485833 STRN4Q9NRL3 753 aa9.32□□□□□ -0.92
SMARCC1-207ENST00000485833 PRMT3O60678 531 aa9.31□□□□□ -0.92
SMARCC1-207ENST00000485833 SLCO4C1Q6ZQN7 724 aa9.31□□□□□ -0.92
SMARCC1-207ENST00000485833 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
SMARCC1-207ENST00000485833 TYRO3Q06418 890 aa9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 FKBP5Q13451 457 aaPredicted RBP9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 OCLNQ16625 522 aa9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 CEP63Q96MT8 703 aa9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 QTRT2Q9H974 415 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 BRD7Q9NPI1 651 aa9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 AVENQ9NQS1 362 aaPredicted RBP9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 GGA1Q9UJY5 639 aa9.3□□□□□ -0.92
SMARCC1-207ENST00000485833 IER5Q5VY09 327 aa9.29□□□□□ -0.92
SMARCC1-207ENST00000485833 MYO19Q96H55 970 aa9.29□□□□□ -0.92
SMARCC1-207ENST00000485833 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 SFSWAPQ12872 951 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 BTLAQ7Z6A9 289 aa9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 CLP1Q92989 425 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMARCC1-207ENST00000485833 NEURL1BA8MQ27 555 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 ADH6P28332 368 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 KCNQ4P56696 695 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 CXXC1Q9P0U4 656 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-207ENST00000485833 SHISA8B8ZZ34 492 aa9.26□□□□□ -0.93
SMARCC1-207ENST00000485833 DGKZQ13574 1117 aa9.26□□□□□ -0.93
SMARCC1-207ENST00000485833 KLK14Q9P0G3 267 aa9.26□□□□□ -0.93
SMARCC1-207ENST00000485833 KCNH4Q9UQ05 1017 aa9.26□□□□□ -0.93
SMARCC1-207ENST00000485833 BCS1LQ9Y276 419 aa9.26□□□□□ -0.93
SMARCC1-207ENST00000485833 EPXP11678 715 aa9.25□□□□□ -0.93
SMARCC1-207ENST00000485833 GRIN2CQ14957 1233 aa9.25□□□□□ -0.93
SMARCC1-207ENST00000485833 SCARF2Q96GP6 870 aaPredicted RBP9.25□□□□□ -0.93
SMARCC1-207ENST00000485833 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
SMARCC1-207ENST00000485833 PCBP4P57723 403 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 SPEM2Q0P670 501 aa9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 C11orf91Q3C1V1 193 aa9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 FCHSD1Q86WN1 690 aa9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 COL26A1Q96A83 441 aa9.24□□□□□ -0.93
SMARCC1-207ENST00000485833 SLC30A3Q99726 388 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms