RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
CLK3-204ENST00000483723 MYD88Q99836 296 aa17.46■□□□□ 0.39
CLK3-204ENST00000483723 USP21Q9UK80 565 aa17.46■□□□□ 0.39
CLK3-204ENST00000483723 STARD3NLO95772 234 aa17.45■□□□□ 0.38
CLK3-204ENST00000483723 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
CLK3-204ENST00000483723 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
CLK3-204ENST00000483723 KAZALD1Q96I82 304 aa17.44■□□□□ 0.38
CLK3-204ENST00000483723 COL15A1P39059 1388 aa17.44■□□□□ 0.38
CLK3-204ENST00000483723 TJP1Q07157 1748 aa17.44■□□□□ 0.38
CLK3-204ENST00000483723 FAM98CQ17RN3 349 aaKnown RBP17.44■□□□□ 0.38
CLK3-204ENST00000483723 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
CLK3-204ENST00000483723 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
CLK3-204ENST00000483723 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
CLK3-204ENST00000483723 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
CLK3-204ENST00000483723 AFDNP55196 1824 aaKnown RBP17.43■□□□□ 0.38
CLK3-204ENST00000483723 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
CLK3-204ENST00000483723 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
CLK3-204ENST00000483723 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
CLK3-204ENST00000483723 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
CLK3-204ENST00000483723 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
CLK3-204ENST00000483723 THSD7AQ9UPZ6 1657 aa17.42■□□□□ 0.38
CLK3-204ENST00000483723 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
CLK3-204ENST00000483723 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
CLK3-204ENST00000483723 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
CLK3-204ENST00000483723 SEC24BO95487 1268 aa17.41■□□□□ 0.38
CLK3-204ENST00000483723 LRRCC1Q9C099 1032 aa17.41■□□□□ 0.38
CLK3-204ENST00000483723 OSBPL3Q9H4L5 887 aa17.41■□□□□ 0.38
CLK3-204ENST00000483723 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
CLK3-204ENST00000483723 ANP32AP39687 249 aaKnown RBP17.41■□□□□ 0.38
CLK3-204ENST00000483723 CASP7P55210 303 aa17.41■□□□□ 0.38
CLK3-204ENST00000483723 H7C1W4 665 aa17.4■□□□□ 0.38
CLK3-204ENST00000483723 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
CLK3-204ENST00000483723 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
CLK3-204ENST00000483723 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
CLK3-204ENST00000483723 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
CLK3-204ENST00000483723 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 GJD4Q96KN9 370 aaPredicted RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 ATRNO75882 1429 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 ATP5J2-PTCD1G3V325 749 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 APBB1O00213 710 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 RABL6Q3YEC7 729 aaPredicted RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
CLK3-204ENST00000483723 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
CLK3-204ENST00000483723 RREB1Q92766 1687 aa17.37■□□□□ 0.37
CLK3-204ENST00000483723 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
CLK3-204ENST00000483723 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
CLK3-204ENST00000483723 MEX3CQ5U5Q3 659 aaKnown RBP17.37■□□□□ 0.37
CLK3-204ENST00000483723 STAP2Q9UGK3 403 aa17.37■□□□□ 0.37
CLK3-204ENST00000483723 AFF2P51816 1311 aa17.37■□□□□ 0.37
CLK3-204ENST00000483723 A0A087WZG4 1122 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
CLK3-204ENST00000483723 PDE1AP54750 535 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CLK3-204ENST00000483723 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
CLK3-204ENST00000483723 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
CLK3-204ENST00000483723 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
CLK3-204ENST00000483723 KCNQ2O43526 872 aa17.35■□□□□ 0.37
CLK3-204ENST00000483723 SIK1P57059 783 aa17.35■□□□□ 0.37
CLK3-204ENST00000483723 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
CLK3-204ENST00000483723 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
CLK3-204ENST00000483723 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
CLK3-204ENST00000483723 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
CLK3-204ENST00000483723 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
CLK3-204ENST00000483723 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
CLK3-204ENST00000483723 UBE3BQ7Z3V4 1068 aa17.34■□□□□ 0.37
CLK3-204ENST00000483723 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
CLK3-204ENST00000483723 TRPC5Q9UL62 973 aaPredicted RBP17.34■□□□□ 0.37
CLK3-204ENST00000483723 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.37
CLK3-204ENST00000483723 AOX1Q06278 1338 aa17.33■□□□□ 0.37
CLK3-204ENST00000483723 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.37
CLK3-204ENST00000483723 MSH5O43196 834 aa17.33■□□□□ 0.37
CLK3-204ENST00000483723 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
CLK3-204ENST00000483723 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
CLK3-204ENST00000483723 EIF5P55010 431 aaKnown RBP17.33■□□□□ 0.36
CLK3-204ENST00000483723 ITPK1Q13572 414 aa17.33■□□□□ 0.36
CLK3-204ENST00000483723 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
CLK3-204ENST00000483723 RGS17Q9UGC6 210 aaPredicted RBP17.33■□□□□ 0.36
CLK3-204ENST00000483723 MX1P20591 662 aa17.32■□□□□ 0.36
CLK3-204ENST00000483723 FOXO4P98177 505 aa17.32■□□□□ 0.36
CLK3-204ENST00000483723 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
CLK3-204ENST00000483723 COPRSQ9NQ92 184 aa17.32■□□□□ 0.36
CLK3-204ENST00000483723 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
CLK3-204ENST00000483723 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
CLK3-204ENST00000483723 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
CLK3-204ENST00000483723 NHSQ6T4R5 1651 aa17.31■□□□□ 0.36
CLK3-204ENST00000483723 HSP90AB3PQ58FF7 597 aa17.31■□□□□ 0.36
CLK3-204ENST00000483723 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
CLK3-204ENST00000483723 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
CLK3-204ENST00000483723 NUP98P52948 1817 aa17.31■□□□□ 0.36
CLK3-204ENST00000483723 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
CLK3-204ENST00000483723 CDC45O75419 566 aa17.3■□□□□ 0.36
CLK3-204ENST00000483723 SDSP20132 328 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms