RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
HDGF-208ENST00000482651 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
HDGF-208ENST00000482651 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 APBB1O00213 710 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 KCNQ3O43525 872 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
HDGF-208ENST00000482651 TGFB2P61812 414 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
HDGF-208ENST00000482651 MYH14Q7Z406 1995 aaKnown RBP11.55□□□□□ -0.56
HDGF-208ENST00000482651 A0A087WZG4 1122 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 TM4SF1P30408 202 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
HDGF-208ENST00000482651 DDR1Q08345 913 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
HDGF-208ENST00000482651 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 C4AP0C0L4 1744 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
HDGF-208ENST00000482651 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
HDGF-208ENST00000482651 PPP1R37O75864 691 aa11.53□□□□□ -0.56
HDGF-208ENST00000482651 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
HDGF-208ENST00000482651 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
HDGF-208ENST00000482651 SMYD5Q6GMV2 418 aa11.53□□□□□ -0.56
HDGF-208ENST00000482651 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
HDGF-208ENST00000482651 SIPA1L3O60292 1781 aaPredicted RBP11.53□□□□□ -0.56
HDGF-208ENST00000482651 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.56
HDGF-208ENST00000482651 A1BGP04217 495 aa11.52□□□□□ -0.57
HDGF-208ENST00000482651 SNRPA1P09661 255 aaKnown RBP11.52□□□□□ -0.57
HDGF-208ENST00000482651 PDIA4P13667 645 aaKnown RBP11.52□□□□□ -0.57
HDGF-208ENST00000482651 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
HDGF-208ENST00000482651 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
HDGF-208ENST00000482651 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
HDGF-208ENST00000482651 DPEP1P16444 411 aa11.51□□□□□ -0.57
HDGF-208ENST00000482651 NFIXQ14938 502 aa11.51□□□□□ -0.57
HDGF-208ENST00000482651 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
HDGF-208ENST00000482651 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
HDGF-208ENST00000482651 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
HDGF-208ENST00000482651 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
HDGF-208ENST00000482651 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
HDGF-208ENST00000482651 KCNA3P22001 575 aa11.49□□□□□ -0.57
HDGF-208ENST00000482651 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
HDGF-208ENST00000482651 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
HDGF-208ENST00000482651 TBC1D2BQ9UPU7 963 aa11.49□□□□□ -0.57
HDGF-208ENST00000482651 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
HDGF-208ENST00000482651 CAMTA2O94983 1202 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 SERPINB2P05120 415 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 RIPK4P57078 832 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 PDE4DQ08499 809 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 LMOD3Q0VAK6 560 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 WDR43Q15061 677 aaKnown RBP eCLIP11.48□□□□□ -0.576e-7■□□□□ 10.3
HDGF-208ENST00000482651 BCS1LQ9Y276 419 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
HDGF-208ENST00000482651 KIAA1551Q9HCM1 1747 aa11.48□□□□□ -0.57
HDGF-208ENST00000482651 TRIM66O15016 1216 aa11.47□□□□□ -0.57
HDGF-208ENST00000482651 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
HDGF-208ENST00000482651 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
HDGF-208ENST00000482651 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
HDGF-208ENST00000482651 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
HDGF-208ENST00000482651 TBC1D9BQ66K14 1250 aa11.47□□□□□ -0.57
HDGF-208ENST00000482651 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
HDGF-208ENST00000482651 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
HDGF-208ENST00000482651 PIM2Q9P1W9 311 aa11.47□□□□□ -0.57
HDGF-208ENST00000482651 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 GIGYF1O75420 1035 aaPredicted RBP11.46□□□□□ -0.57
HDGF-208ENST00000482651 CHRNA5P30532 468 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.57
HDGF-208ENST00000482651 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
HDGF-208ENST00000482651 RUNDC1Q96C34 613 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 BABAM1Q9NWV8 329 aa11.46□□□□□ -0.57
HDGF-208ENST00000482651 ADCY9O60503 1353 aa11.45□□□□□ -0.58
HDGF-208ENST00000482651 DALRD3Q5D0E6 543 aaKnown RBP11.45□□□□□ -0.58
HDGF-208ENST00000482651 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
HDGF-208ENST00000482651 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
HDGF-208ENST00000482651 SCN7AQ01118 1682 aa11.45□□□□□ -0.58
HDGF-208ENST00000482651 CHD4Q14839 1912 aa11.45□□□□□ -0.58
HDGF-208ENST00000482651 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 CCER2I3L3R5 266 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 SETDB2Q96T68 719 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 ZNF652Q9Y2D9 606 aa11.44□□□□□ -0.58
HDGF-208ENST00000482651 RRP7AQ9Y3A4 280 aaKnown RBP11.44□□□□□ -0.58
HDGF-208ENST00000482651 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 PRR5LQ6MZQ0 368 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 ARHGAP27Q6ZUM4 889 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 BRIP1Q9BX63 1249 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 FAM117AQ9C073 453 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 KDM3BQ7LBC6 1761 aa11.43□□□□□ -0.58
HDGF-208ENST00000482651 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
HDGF-208ENST00000482651 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
HDGF-208ENST00000482651 H0YIN7 160 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms