RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 CCDC24Q8N4L8 307 aa29.81■■■□□ 2.36
CYTH3-208ENST00000482460 ZNF526Q8TF50 670 aaPredicted RBP29.8■■■□□ 2.36
CYTH3-208ENST00000482460 ST5P78524 1137 aa29.79■■■□□ 2.36
CYTH3-208ENST00000482460 NGEFQ8N5V2 710 aa29.79■■■□□ 2.36
CYTH3-208ENST00000482460 TRIM35Q9UPQ4 493 aa29.79■■■□□ 2.36
CYTH3-208ENST00000482460 NBPF5PQ86XG9 351 aaPredicted RBP29.78■■■□□ 2.36
CYTH3-208ENST00000482460 NIP7Q9Y221 180 aaKnown RBP eCLIP29.78■■■□□ 2.36
CYTH3-208ENST00000482460 ERBB4Q15303 1308 aa29.77■■■□□ 2.36
CYTH3-208ENST00000482460 HLFQ16534 295 aa29.77■■■□□ 2.36
CYTH3-208ENST00000482460 C9orf131Q5VYM1 1079 aa29.77■■■□□ 2.36
CYTH3-208ENST00000482460 ERVV-1B6SEH8 477 aa29.76■■■□□ 2.35
CYTH3-208ENST00000482460 MYL6BP14649 208 aa29.76■■■□□ 2.35
CYTH3-208ENST00000482460 ZNF622Q969S3 477 aaKnown RBP eCLIP29.76■■■□□ 2.359e-6■□□□□ 9.4
CYTH3-208ENST00000482460 TPTE2Q6XPS3 522 aa29.75■■■□□ 2.35
CYTH3-208ENST00000482460 SBF1O95248 1867 aa29.74■■■□□ 2.35
CYTH3-208ENST00000482460 CHL1O00533 1208 aa29.74■■■□□ 2.35
CYTH3-208ENST00000482460 MAP3K15Q6ZN16 1313 aa29.73■■■□□ 2.35
CYTH3-208ENST00000482460 KIF6Q6ZMV9 814 aa29.73■■■□□ 2.35
CYTH3-208ENST00000482460 TTLL7Q6ZT98 887 aa29.73■■■□□ 2.35
CYTH3-208ENST00000482460 NUP98P52948 1817 aa29.73■■■□□ 2.35
CYTH3-208ENST00000482460 COL11A2P13942 1736 aaPredicted RBP29.72■■■□□ 2.35
CYTH3-208ENST00000482460 EIF2S2P20042 333 aaKnown RBP29.72■■■□□ 2.35
CYTH3-208ENST00000482460 ZNF316A6NFI3 1004 aaPredicted RBP29.71■■■□□ 2.35
CYTH3-208ENST00000482460 SRGNP10124 158 aa29.71■■■□□ 2.35
CYTH3-208ENST00000482460 RNF181Q9P0P0 153 aa29.71■■■□□ 2.35
CYTH3-208ENST00000482460 LAS1LQ9Y4W2 734 aaKnown RBP29.71■■■□□ 2.35
CYTH3-208ENST00000482460 STYK1Q6J9G0 422 aa29.7■■■□□ 2.35
CYTH3-208ENST00000482460 PDIA6Q15084 440 aa29.69■■■□□ 2.34
CYTH3-208ENST00000482460 CNKSR1Q969H4 720 aa29.69■■■□□ 2.34
CYTH3-208ENST00000482460 MASTLQ96GX5 879 aa29.69■■■□□ 2.34
CYTH3-208ENST00000482460 FAM177BA6PVY3 158 aa29.68■■■□□ 2.34
CYTH3-208ENST00000482460 APAF1O14727 1248 aa29.68■■■□□ 2.34
CYTH3-208ENST00000482460 RASSF7Q02833 373 aa29.68■■■□□ 2.34
CYTH3-208ENST00000482460 LRP10Q7Z4F1 713 aa29.68■■■□□ 2.34
CYTH3-208ENST00000482460 KLRG2A4D1S0 409 aaPredicted RBP29.67■■■□□ 2.34
CYTH3-208ENST00000482460 ZBTB3Q9H5J0 574 aa29.67■■■□□ 2.34
CYTH3-208ENST00000482460 KIF3CO14782 793 aa29.66■■■□□ 2.34
CYTH3-208ENST00000482460 CFAP44Q96MT7 982 aa29.66■■■□□ 2.34
CYTH3-208ENST00000482460 NYXQ9GZU5 481 aa29.66■■■□□ 2.34
CYTH3-208ENST00000482460 C21orf2O43822 256 aa29.65■■■□□ 2.34
CYTH3-208ENST00000482460 LMNB1P20700 586 aa29.65■■■□□ 2.34
CYTH3-208ENST00000482460 GTF2E1P29083 439 aaPredicted RBP29.65■■■□□ 2.34
CYTH3-208ENST00000482460 GIGYF2Q6Y7W6 1299 aaKnown RBP29.65■■■□□ 2.34
CYTH3-208ENST00000482460 KRT24Q2M2I5 525 aa29.64■■■□□ 2.34
CYTH3-208ENST00000482460 PROSER3Q2NL68 480 aa29.64■■■□□ 2.34
CYTH3-208ENST00000482460 ZNF219Q9P2Y4 722 aaPredicted RBP29.64■■■□□ 2.34
CYTH3-208ENST00000482460 SLX4Q8IY92 1834 aa29.64■■■□□ 2.33
CYTH3-208ENST00000482460 SENP3-EIF4A1A0A087X0R7 540 aa29.63■■■□□ 2.33
CYTH3-208ENST00000482460 NFKBIEO00221 500 aa29.63■■■□□ 2.33
CYTH3-208ENST00000482460 NPR1P16066 1061 aa29.63■■■□□ 2.33
CYTH3-208ENST00000482460 CCDC184Q52MB2 194 aa29.63■■■□□ 2.33
CYTH3-208ENST00000482460 NECTIN2Q92692 538 aa29.63■■■□□ 2.33
CYTH3-208ENST00000482460 CCDC88AQ3V6T2 1871 aa29.62■■■□□ 2.33
CYTH3-208ENST00000482460 ANXA1P04083 346 aa29.62■■■□□ 2.33
CYTH3-208ENST00000482460 PRELPP51888 382 aa29.62■■■□□ 2.33
CYTH3-208ENST00000482460 PRPF40BQ6NWY9 871 aaKnown RBP29.62■■■□□ 2.33
CYTH3-208ENST00000482460 ZNF34Q8IZ26 560 aa29.62■■■□□ 2.33
CYTH3-208ENST00000482460 ARFGEF2Q9Y6D5 1785 aa29.62■■■□□ 2.33
CYTH3-208ENST00000482460 CACNA1SQ13698 1873 aa29.61■■■□□ 2.33
CYTH3-208ENST00000482460 GPTP24298 496 aa29.61■■■□□ 2.33
CYTH3-208ENST00000482460 ZC3H4Q9UPT8 1303 aaKnown RBP29.61■■■□□ 2.33
CYTH3-208ENST00000482460 FER1L6Q2WGJ9 1857 aa29.6■■■□□ 2.33
CYTH3-208ENST00000482460 HOXB7P09629 217 aa29.6■■■□□ 2.33
CYTH3-208ENST00000482460 DDX21Q9NR30 783 aaKnown RBP eCLIP29.6■■■□□ 2.33
CYTH3-208ENST00000482460 UBN2Q6ZU65 1347 aa29.6■■■□□ 2.33
CYTH3-208ENST00000482460 ZNF853P0CG23 659 aa29.59■■■□□ 2.33
CYTH3-208ENST00000482460 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
CYTH3-208ENST00000482460 SOGA3Q5TF21 947 aa29.59■■■□□ 2.33
CYTH3-208ENST00000482460 NUTM1Q86Y26 1132 aa29.59■■■□□ 2.33
CYTH3-208ENST00000482460 NMRK2Q9NPI5 230 aa29.59■■■□□ 2.33
CYTH3-208ENST00000482460 IBTKQ9P2D0 1353 aaPredicted RBP29.59■■■□□ 2.33
CYTH3-208ENST00000482460 SUSD4Q5VX71 490 aa29.58■■■□□ 2.33
CYTH3-208ENST00000482460 COPS6Q7L5N1 327 aa29.58■■■□□ 2.33
CYTH3-208ENST00000482460 KDM2BQ8NHM5 1336 aa29.58■■■□□ 2.33
CYTH3-208ENST00000482460 MBIPQ9NS73 344 aa29.58■■■□□ 2.33
CYTH3-208ENST00000482460 ANP32CO43423 234 aa29.57■■■□□ 2.32
CYTH3-208ENST00000482460 ERFEQ4G0M1 354 aa29.57■■■□□ 2.32
CYTH3-208ENST00000482460 XAGE3Q8WTP9 111 aa29.57■■■□□ 2.32
CYTH3-208ENST00000482460 GNAI1P63096 354 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 AIMP1Q12904 312 aaKnown RBP29.56■■■□□ 2.32
CYTH3-208ENST00000482460 PARP10Q53GL7 1025 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 HDGFL1Q5TGJ6 251 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 PPP1R42Q7Z4L9 355 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 C7orf43Q8WVR3 580 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 IFT57Q9NWB7 429 aa29.56■■■□□ 2.32
CYTH3-208ENST00000482460 ABCC12Q96J65 1359 aa29.55■■■□□ 2.32
CYTH3-208ENST00000482460 LTBP3Q9NS15 1303 aa29.55■■■□□ 2.32
CYTH3-208ENST00000482460 ALDH1B1P30837 517 aa29.55■■■□□ 2.32
CYTH3-208ENST00000482460 DUSP27Q5VZP5 1158 aa29.55■■■□□ 2.32
CYTH3-208ENST00000482460 NTSR2O95665 410 aa29.54■■■□□ 2.32
CYTH3-208ENST00000482460 CRY2Q49AN0 593 aa29.54■■■□□ 2.32
CYTH3-208ENST00000482460 TAOK3Q9H2K8 898 aa29.54■■■□□ 2.32
CYTH3-208ENST00000482460 CHPF2Q9P2E5 772 aa29.54■■■□□ 2.32
CYTH3-208ENST00000482460 RIC1Q4ADV7 1423 aa29.54■■■□□ 2.32
CYTH3-208ENST00000482460 TOMM70O94826 608 aa29.53■■■□□ 2.32
CYTH3-208ENST00000482460 DICER1Q9UPY3 1922 aaKnown RBP29.53■■■□□ 2.32
CYTH3-208ENST00000482460 TNRC6CQ9HCJ0 1690 aaKnown RBP29.53■■■□□ 2.32
CYTH3-208ENST00000482460 HSP90AB3PQ58FF7 597 aa29.52■■■□□ 2.32
CYTH3-208ENST00000482460 DBF4Q9UBU7 674 aaPredicted RBP29.52■■■□□ 2.32
CYTH3-208ENST00000482460 GLTPD2A6NH11 291 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms