RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 FANCIQ9NVI1 1328 aa31.06■■■□□ 2.56
ARF1-208ENST00000478336 BICDL1Q6ZP65 573 aa31.06■■■□□ 2.56
ARF1-208ENST00000478336 CHPF2Q9P2E5 772 aa31.06■■■□□ 2.56
ARF1-208ENST00000478336 CARMIL3Q8ND23 1372 aa31.05■■■□□ 2.56
ARF1-208ENST00000478336 MAP3K15Q6ZN16 1313 aa31.05■■■□□ 2.56
ARF1-208ENST00000478336 ELL2O00472 640 aaPredicted RBP31.05■■■□□ 2.56
ARF1-208ENST00000478336 NUP98P52948 1817 aa31.04■■■□□ 2.56
ARF1-208ENST00000478336 ERVV-1B6SEH8 477 aa31.04■■■□□ 2.56
ARF1-208ENST00000478336 SERPINB2P05120 415 aa31.04■■■□□ 2.56
ARF1-208ENST00000478336 KIF6Q6ZMV9 814 aa31.04■■■□□ 2.56
ARF1-208ENST00000478336 SPINK5Q9NQ38 1064 aaPredicted RBP31.04■■■□□ 2.56
ARF1-208ENST00000478336 PXDNLA1KZ92 1463 aa31.03■■■□□ 2.56
ARF1-208ENST00000478336 HLFQ16534 295 aa31.03■■■□□ 2.56
ARF1-208ENST00000478336 TSPYL6Q8N831 410 aa31.03■■■□□ 2.56
ARF1-208ENST00000478336 DBF4Q9UBU7 674 aaPredicted RBP31.02■■■□□ 2.56
ARF1-208ENST00000478336 SETDB2Q96T68 719 aa31.01■■■□□ 2.55
ARF1-208ENST00000478336 ATP10DQ9P241 1426 aa31■■■□□ 2.55
ARF1-208ENST00000478336 ZBTB3Q9H5J0 574 aa31■■■□□ 2.55
ARF1-208ENST00000478336 N4BP2Q86UW6 1770 aaPredicted RBP31■■■□□ 2.55
ARF1-208ENST00000478336 TGFB2P61812 414 aa30.99■■■□□ 2.55
ARF1-208ENST00000478336 COPS6Q7L5N1 327 aa30.99■■■□□ 2.55
ARF1-208ENST00000478336 XAGE3Q8WTP9 111 aa30.99■■■□□ 2.55
ARF1-208ENST00000478336 TWISTNBQ3B726 338 aaPredicted RBP30.97■■■□□ 2.55
ARF1-208ENST00000478336 MYH16Q9H6N6 1097 aa30.97■■■□□ 2.55
ARF1-208ENST00000478336 NIP7Q9Y221 180 aaKnown RBP eCLIP30.97■■■□□ 2.55
ARF1-208ENST00000478336 DCAF8L1A6NGE4 600 aa30.96■■■□□ 2.55
ARF1-208ENST00000478336 GOLGA2Q08379 1002 aa30.96■■■□□ 2.55
ARF1-208ENST00000478336 PRR5LQ6MZQ0 368 aa30.96■■■□□ 2.55
ARF1-208ENST00000478336 GIGYF2Q6Y7W6 1299 aaKnown RBP30.96■■■□□ 2.55
ARF1-208ENST00000478336 CHMP4AQ9BY43 222 aa30.96■■■□□ 2.55
ARF1-208ENST00000478336 HYPKQ9NX55 129 aa30.96■■■□□ 2.55
ARF1-208ENST00000478336 AIMP1Q12904 312 aaKnown RBP30.95■■■□□ 2.55
ARF1-208ENST00000478336 BRCA1P38398 1863 aaKnown RBP30.95■■■□□ 2.54
ARF1-208ENST00000478336 ANKRD31Q8N7Z5 1873 aa30.95■■■□□ 2.54
ARF1-208ENST00000478336 CCDC30Q5VVM6 783 aa30.94■■■□□ 2.54
ARF1-208ENST00000478336 ANKRD36CQ5JPF3 1778 aa30.93■■■□□ 2.54
ARF1-208ENST00000478336 DPEP1P16444 411 aa30.93■■■□□ 2.54
ARF1-208ENST00000478336 EXOSC9Q06265 439 aaKnown RBP30.93■■■□□ 2.54
ARF1-208ENST00000478336 CNBD1Q8NA66 436 aa30.93■■■□□ 2.54
ARF1-208ENST00000478336 A0A0G2JLW4 131 aa30.92■■■□□ 2.54
ARF1-208ENST00000478336 YBX3P16989 372 aaKnown RBP eCLIP30.91■■■□□ 2.542e-15■□□□□ 9
ARF1-208ENST00000478336 GPR162Q16538 588 aa30.91■■■□□ 2.54
ARF1-208ENST00000478336 NBPF5PQ86XG9 351 aaPredicted RBP30.91■■■□□ 2.54
ARF1-208ENST00000478336 ZNF34Q8IZ26 560 aa30.91■■■□□ 2.54
ARF1-208ENST00000478336 DLEC1Q9Y238 1755 aa30.9■■■□□ 2.54
ARF1-208ENST00000478336 UBN2Q6ZU65 1347 aa30.9■■■□□ 2.54
ARF1-208ENST00000478336 KCNA3P22001 575 aa30.89■■■□□ 2.54
ARF1-208ENST00000478336 PELP1Q8IZL8 1130 aaKnown RBP30.89■■■□□ 2.54
ARF1-208ENST00000478336 IBTKQ9P2D0 1353 aaPredicted RBP30.89■■■□□ 2.54
ARF1-208ENST00000478336 GOLGB1Q14789 3259 aaKnown RBP30.88■■■□□ 2.53
ARF1-208ENST00000478336 VAMP4O75379 141 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 GPTP24298 496 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 CCDC24Q8N4L8 307 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 PLBD2Q8NHP8 589 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 BRIP1Q9BX63 1249 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 PHAXQ9H814 394 aaKnown RBP30.88■■■□□ 2.53
ARF1-208ENST00000478336 UTRNP46939 3433 aa30.88■■■□□ 2.53
ARF1-208ENST00000478336 ARFGEF2Q9Y6D5 1785 aa30.87■■■□□ 2.53
ARF1-208ENST00000478336 E9PSI1 815 aa30.87■■■□□ 2.53
ARF1-208ENST00000478336 CHRNA5P30532 468 aa30.87■■■□□ 2.53
ARF1-208ENST00000478336 ST5P78524 1137 aa30.87■■■□□ 2.53
ARF1-208ENST00000478336 HSP90AB3PQ58FF7 597 aa30.86■■■□□ 2.53
ARF1-208ENST00000478336 TPTE2Q6XPS3 522 aa30.86■■■□□ 2.53
ARF1-208ENST00000478336 ANKRD13DQ6ZTN6 518 aa30.86■■■□□ 2.53
ARF1-208ENST00000478336 STK31Q9BXU1 1019 aa30.86■■■□□ 2.53
ARF1-208ENST00000478336 WWC3Q9ULE0 1092 aa30.86■■■□□ 2.53
ARF1-208ENST00000478336 COL11A2P13942 1736 aaPredicted RBP30.86■■■□□ 2.53
ARF1-208ENST00000478336 NPHP1O15259 732 aa30.85■■■□□ 2.53
ARF1-208ENST00000478336 SLFN5Q08AF3 891 aa30.85■■■□□ 2.53
ARF1-208ENST00000478336 FAM177BA6PVY3 158 aa30.84■■■□□ 2.53
ARF1-208ENST00000478336 TCERG1O14776 1098 aaKnown RBP30.84■■■□□ 2.53
ARF1-208ENST00000478336 TCIRG1Q13488 830 aa30.84■■■□□ 2.53
ARF1-208ENST00000478336 PARP10Q53GL7 1025 aa30.84■■■□□ 2.53
ARF1-208ENST00000478336 CACNA1FO60840 1977 aa30.84■■■□□ 2.53
ARF1-208ENST00000478336 SUSD4Q5VX71 490 aa30.83■■■□□ 2.53
ARF1-208ENST00000478336 NYXQ9GZU5 481 aa30.83■■■□□ 2.53
ARF1-208ENST00000478336 PDE6BP35913 854 aa30.82■■■□□ 2.52
ARF1-208ENST00000478336 C2CD5Q86YS7 1000 aa30.82■■■□□ 2.52
ARF1-208ENST00000478336 CDCA7LQ96GN5 454 aa30.82■■■□□ 2.52
ARF1-208ENST00000478336 PIM2Q9P1W9 311 aa30.82■■■□□ 2.52
ARF1-208ENST00000478336 PDZRN3Q9UPQ7 1066 aa30.82■■■□□ 2.52
ARF1-208ENST00000478336 GRIN3BO60391 1043 aa30.81■■■□□ 2.52
ARF1-208ENST00000478336 NTSR2O95665 410 aa30.81■■■□□ 2.52
ARF1-208ENST00000478336 ABCC12Q96J65 1359 aa30.8■■■□□ 2.52
ARF1-208ENST00000478336 ARFGEF1Q9Y6D6 1849 aa30.8■■■□□ 2.52
ARF1-208ENST00000478336 TNRC6CQ9HCJ0 1690 aaKnown RBP30.8■■■□□ 2.52
ARF1-208ENST00000478336 H0YIN7 160 aa30.79■■■□□ 2.52
ARF1-208ENST00000478336 SLC4A2P04920 1241 aa30.79■■■□□ 2.52
ARF1-208ENST00000478336 NLRP10Q86W26 655 aa30.79■■■□□ 2.52
ARF1-208ENST00000478336 NUTM1Q86Y26 1132 aa30.79■■■□□ 2.52
ARF1-208ENST00000478336 TRMT2AQ8IZ69 625 aaKnown RBP30.79■■■□□ 2.52
ARF1-208ENST00000478336 RIC1Q4ADV7 1423 aa30.79■■■□□ 2.52
ARF1-208ENST00000478336 G2E3Q7L622 706 aa30.78■■■□□ 2.52
ARF1-208ENST00000478336 PPP1R42Q7Z4L9 355 aa30.78■■■□□ 2.52
ARF1-208ENST00000478336 RIC3Q7Z5B4 369 aa30.78■■■□□ 2.52
ARF1-208ENST00000478336 ISCA1Q9BUE6 129 aa30.78■■■□□ 2.52
ARF1-208ENST00000478336 BCS1LQ9Y276 419 aa30.78■■■□□ 2.52
ARF1-208ENST00000478336 KLRG2A4D1S0 409 aaPredicted RBP30.77■■■□□ 2.52
ARF1-208ENST00000478336 GTF2E1P29083 439 aaPredicted RBP30.77■■■□□ 2.52
ARF1-208ENST00000478336 ERFEQ4G0M1 354 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms