RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 ATP10DQ9P241 1426 aa18.35■□□□□ 0.53
SRRT-210ENST00000477529 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
SRRT-210ENST00000477529 GNAI1P63096 354 aa18.35■□□□□ 0.53
SRRT-210ENST00000477529 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
SRRT-210ENST00000477529 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
SRRT-210ENST00000477529 YBX3P16989 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
SRRT-210ENST00000477529 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
SRRT-210ENST00000477529 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
SRRT-210ENST00000477529 RGL2O15211 777 aa18.33■□□□□ 0.52
SRRT-210ENST00000477529 HOXB7P09629 217 aa18.33■□□□□ 0.52
SRRT-210ENST00000477529 MYL6BP14649 208 aa18.33■□□□□ 0.52
SRRT-210ENST00000477529 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
SRRT-210ENST00000477529 PDIA6Q15084 440 aa18.33■□□□□ 0.52
SRRT-210ENST00000477529 PROSER3Q2NL68 480 aa18.33■□□□□ 0.52
SRRT-210ENST00000477529 ANXA1P04083 346 aa18.32■□□□□ 0.52
SRRT-210ENST00000477529 SERPINB2P05120 415 aa18.32■□□□□ 0.52
SRRT-210ENST00000477529 GPR162Q16538 588 aa18.32■□□□□ 0.52
SRRT-210ENST00000477529 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
SRRT-210ENST00000477529 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
SRRT-210ENST00000477529 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
SRRT-210ENST00000477529 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
SRRT-210ENST00000477529 TGFB2P61812 414 aa18.31■□□□□ 0.52
SRRT-210ENST00000477529 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
SRRT-210ENST00000477529 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
SRRT-210ENST00000477529 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
SRRT-210ENST00000477529 IL16Q14005 1332 aa18.3■□□□□ 0.52
SRRT-210ENST00000477529 HLFQ16534 295 aa18.3■□□□□ 0.52
SRRT-210ENST00000477529 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
SRRT-210ENST00000477529 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
SRRT-210ENST00000477529 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
SRRT-210ENST00000477529 DPEP1P16444 411 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 KIF6Q6ZMV9 814 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 SETDB2Q96T68 719 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
SRRT-210ENST00000477529 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 KCNA3P22001 575 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 PRR5LQ6MZQ0 368 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 DDX21Q9NR30 783 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRRT-210ENST00000477529 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
SRRT-210ENST00000477529 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
SRRT-210ENST00000477529 CNBD1Q8NA66 436 aa18.27■□□□□ 0.52
SRRT-210ENST00000477529 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
SRRT-210ENST00000477529 ZBTB3Q9H5J0 574 aa18.27■□□□□ 0.52
SRRT-210ENST00000477529 NIP7Q9Y221 180 aaKnown RBP eCLIP18.27■□□□□ 0.52
SRRT-210ENST00000477529 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.51
SRRT-210ENST00000477529 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
SRRT-210ENST00000477529 CHRNA5P30532 468 aa18.26■□□□□ 0.51
SRRT-210ENST00000477529 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
SRRT-210ENST00000477529 RIC1Q4ADV7 1423 aa18.25■□□□□ 0.51
SRRT-210ENST00000477529 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
SRRT-210ENST00000477529 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
SRRT-210ENST00000477529 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
SRRT-210ENST00000477529 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
SRRT-210ENST00000477529 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
SRRT-210ENST00000477529 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
SRRT-210ENST00000477529 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
SRRT-210ENST00000477529 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
SRRT-210ENST00000477529 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
SRRT-210ENST00000477529 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
SRRT-210ENST00000477529 ABCC12Q96J65 1359 aa18.24■□□□□ 0.51
SRRT-210ENST00000477529 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
SRRT-210ENST00000477529 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
SRRT-210ENST00000477529 ST5P78524 1137 aa18.22■□□□□ 0.51
SRRT-210ENST00000477529 BRIP1Q9BX63 1249 aa18.22■□□□□ 0.51
SRRT-210ENST00000477529 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
SRRT-210ENST00000477529 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
SRRT-210ENST00000477529 GPTP24298 496 aa18.21■□□□□ 0.51
SRRT-210ENST00000477529 YY1P25490 414 aa18.21■□□□□ 0.51
SRRT-210ENST00000477529 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
SRRT-210ENST00000477529 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
SRRT-210ENST00000477529 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
SRRT-210ENST00000477529 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 NPHP1O15259 732 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 C2CD5Q86YS7 1000 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 PSME4Q14997 1843 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
SRRT-210ENST00000477529 PDE6BP35913 854 aa18.19■□□□□ 0.5
SRRT-210ENST00000477529 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
SRRT-210ENST00000477529 COL4A1P02462 1669 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 ADCY9O60503 1353 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 H0YIN7 160 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 NTSR2O95665 410 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
SRRT-210ENST00000477529 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 MIER1Q8N108 512 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
SRRT-210ENST00000477529 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
SRRT-210ENST00000477529 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
SRRT-210ENST00000477529 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
SRRT-210ENST00000477529 NUTM1Q86Y26 1132 aa18.17■□□□□ 0.5
SRRT-210ENST00000477529 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
SRRT-210ENST00000477529 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
SRRT-210ENST00000477529 HSP90AB3PQ58FF7 597 aa18.16■□□□□ 0.5
SRRT-210ENST00000477529 KLRG2A4D1S0 409 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms