RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
COPS3-207ENST00000477299 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
COPS3-207ENST00000477299 PTGER2P43116 358 aa20.41■□□□□ 0.86
COPS3-207ENST00000477299 SLC16A10Q8TF71 515 aa20.41■□□□□ 0.86
COPS3-207ENST00000477299 MTFR1LQ9H019 292 aa20.41■□□□□ 0.86
COPS3-207ENST00000477299 HYPKQ9NX55 129 aa20.41■□□□□ 0.86
COPS3-207ENST00000477299 AFDNP55196 1824 aaKnown RBP20.4■□□□□ 0.86
COPS3-207ENST00000477299 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 BICDL1Q6ZP65 573 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
COPS3-207ENST00000477299 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
COPS3-207ENST00000477299 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 ARFGEF2Q9Y6D5 1785 aa20.4■□□□□ 0.86
COPS3-207ENST00000477299 MAP3K15Q6ZN16 1313 aa20.39■□□□□ 0.85
COPS3-207ENST00000477299 TM4SF1P30408 202 aa20.38■□□□□ 0.85
COPS3-207ENST00000477299 DDR1Q08345 913 aa20.38■□□□□ 0.85
COPS3-207ENST00000477299 NFIXQ14938 502 aa20.38■□□□□ 0.85
COPS3-207ENST00000477299 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
COPS3-207ENST00000477299 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
COPS3-207ENST00000477299 BCAR3O75815 825 aa20.36■□□□□ 0.85
COPS3-207ENST00000477299 MMP10P09238 476 aa20.36■□□□□ 0.85
COPS3-207ENST00000477299 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
COPS3-207ENST00000477299 ANKRD13DQ6ZTN6 518 aa20.36■□□□□ 0.85
COPS3-207ENST00000477299 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
COPS3-207ENST00000477299 SPON1Q9HCB6 807 aa20.36■□□□□ 0.85
COPS3-207ENST00000477299 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
COPS3-207ENST00000477299 GPTP24298 496 aa20.35■□□□□ 0.85
COPS3-207ENST00000477299 FLIIQ13045 1269 aa20.35■□□□□ 0.85
COPS3-207ENST00000477299 ADCY9O60503 1353 aa20.34■□□□□ 0.85
COPS3-207ENST00000477299 GIGYF2Q6Y7W6 1299 aaKnown RBP20.34■□□□□ 0.85
COPS3-207ENST00000477299 PLBD2Q8NHP8 589 aa20.34■□□□□ 0.85
COPS3-207ENST00000477299 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 F6X3S4 739 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 CHMP4AQ9BY43 222 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 MAP3K2Q9Y2U5 619 aa20.33■□□□□ 0.85
COPS3-207ENST00000477299 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
COPS3-207ENST00000477299 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
COPS3-207ENST00000477299 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
COPS3-207ENST00000477299 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
COPS3-207ENST00000477299 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
COPS3-207ENST00000477299 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
COPS3-207ENST00000477299 ZNF34Q8IZ26 560 aa20.32■□□□□ 0.84
COPS3-207ENST00000477299 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
COPS3-207ENST00000477299 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
COPS3-207ENST00000477299 FKBP5Q13451 457 aaPredicted RBP20.31■□□□□ 0.84
COPS3-207ENST00000477299 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
COPS3-207ENST00000477299 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
COPS3-207ENST00000477299 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
COPS3-207ENST00000477299 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
COPS3-207ENST00000477299 MYD88Q99836 296 aa20.3■□□□□ 0.84
COPS3-207ENST00000477299 NOB1Q9ULX3 412 aaKnown RBP20.3■□□□□ 0.84
COPS3-207ENST00000477299 LRP5O75197 1615 aa20.29■□□□□ 0.84
COPS3-207ENST00000477299 SERPINB2P05120 415 aa20.29■□□□□ 0.84
COPS3-207ENST00000477299 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
COPS3-207ENST00000477299 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
COPS3-207ENST00000477299 POLD1P28340 1107 aa20.28■□□□□ 0.84
COPS3-207ENST00000477299 SUSD4Q5VX71 490 aa20.28■□□□□ 0.84
COPS3-207ENST00000477299 SYNE4Q8N205 404 aa20.28■□□□□ 0.84
COPS3-207ENST00000477299 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
COPS3-207ENST00000477299 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
COPS3-207ENST00000477299 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
COPS3-207ENST00000477299 ATP10DQ9P241 1426 aa20.27■□□□□ 0.84
COPS3-207ENST00000477299 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
COPS3-207ENST00000477299 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
COPS3-207ENST00000477299 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
COPS3-207ENST00000477299 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
COPS3-207ENST00000477299 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
COPS3-207ENST00000477299 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
COPS3-207ENST00000477299 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
COPS3-207ENST00000477299 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
COPS3-207ENST00000477299 RGL2O15211 777 aa20.25■□□□□ 0.83
COPS3-207ENST00000477299 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
COPS3-207ENST00000477299 PRR5LQ6MZQ0 368 aa20.25■□□□□ 0.83
COPS3-207ENST00000477299 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
COPS3-207ENST00000477299 DNAAF4Q8WXU2 420 aa20.25■□□□□ 0.83
COPS3-207ENST00000477299 PPP1R1BQ9UD71 204 aaPredicted RBP20.25■□□□□ 0.83
COPS3-207ENST00000477299 N4BP2Q86UW6 1770 aaPredicted RBP20.25■□□□□ 0.83
COPS3-207ENST00000477299 KIF13BQ9NQT8 1826 aa20.25■□□□□ 0.83
COPS3-207ENST00000477299 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
COPS3-207ENST00000477299 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
COPS3-207ENST00000477299 RCAN3Q9UKA8 241 aa20.24■□□□□ 0.83
COPS3-207ENST00000477299 NTSR2O95665 410 aa20.23■□□□□ 0.83
COPS3-207ENST00000477299 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
COPS3-207ENST00000477299 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
COPS3-207ENST00000477299 SLC4A10Q6U841 1118 aa20.23■□□□□ 0.83
COPS3-207ENST00000477299 NBPF5PQ86XG9 351 aaPredicted RBP20.23■□□□□ 0.83
COPS3-207ENST00000477299 FHDC1Q9C0D6 1143 aaPredicted RBP20.23■□□□□ 0.83
COPS3-207ENST00000477299 KIAA1551Q9HCM1 1747 aa20.23■□□□□ 0.83
COPS3-207ENST00000477299 BEND3Q5T5X7 828 aa20.22■□□□□ 0.83
COPS3-207ENST00000477299 NLGN2Q8NFZ4 835 aa20.21■□□□□ 0.83
COPS3-207ENST00000477299 TNRC6CQ9HCJ0 1690 aaKnown RBP20.21■□□□□ 0.83
COPS3-207ENST00000477299 PTPRCP08575 1304 aa20.21■□□□□ 0.83
COPS3-207ENST00000477299 LAMB2P55268 1798 aa20.21■□□□□ 0.83
COPS3-207ENST00000477299 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms