RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 CLEC4GQ6UXB4 293 aa19.47■□□□□ 0.71
DFFA-203ENST00000476658 TTLL7Q6ZT98 887 aa19.47■□□□□ 0.71
DFFA-203ENST00000476658 C8orf58Q8NAV2 365 aa19.47■□□□□ 0.71
DFFA-203ENST00000476658 SETDB2Q96T68 719 aa19.47■□□□□ 0.71
DFFA-203ENST00000476658 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
DFFA-203ENST00000476658 GPR162Q16538 588 aa19.46■□□□□ 0.71
DFFA-203ENST00000476658 DDX21Q9NR30 783 aaKnown RBP eCLIP19.46■□□□□ 0.71
DFFA-203ENST00000476658 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
DFFA-203ENST00000476658 MAP3K15Q6ZN16 1313 aa19.46■□□□□ 0.71
DFFA-203ENST00000476658 KIAA1551Q9HCM1 1747 aa19.45■□□□□ 0.7
DFFA-203ENST00000476658 HLFQ16534 295 aa19.45■□□□□ 0.7
DFFA-203ENST00000476658 ZBTB3Q9H5J0 574 aa19.45■□□□□ 0.7
DFFA-203ENST00000476658 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 NPHP1O15259 732 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 TGFB2P61812 414 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 AIMP1Q12904 312 aaKnown RBP19.44■□□□□ 0.7
DFFA-203ENST00000476658 LRP10Q7Z4F1 713 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 DBF4Q9UBU7 674 aaPredicted RBP19.44■□□□□ 0.7
DFFA-203ENST00000476658 WWC3Q9ULE0 1092 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
DFFA-203ENST00000476658 PXDNLA1KZ92 1463 aa19.43■□□□□ 0.7
DFFA-203ENST00000476658 RGL2O15211 777 aa19.43■□□□□ 0.7
DFFA-203ENST00000476658 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
DFFA-203ENST00000476658 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
DFFA-203ENST00000476658 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
DFFA-203ENST00000476658 NIP7Q9Y221 180 aaKnown RBP eCLIP19.43■□□□□ 0.7
DFFA-203ENST00000476658 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
DFFA-203ENST00000476658 DPEP1P16444 411 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 GOLGA2Q08379 1002 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 CNBD1Q8NA66 436 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 HYPKQ9NX55 129 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 ANKRD31Q8N7Z5 1873 aa19.41■□□□□ 0.7
DFFA-203ENST00000476658 ANKRD36CQ5JPF3 1778 aa19.4■□□□□ 0.7
DFFA-203ENST00000476658 BRCA1P38398 1863 aaKnown RBP19.4■□□□□ 0.7
DFFA-203ENST00000476658 FAM177BA6PVY3 158 aa19.4■□□□□ 0.7
DFFA-203ENST00000476658 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
DFFA-203ENST00000476658 CCDC30Q5VVM6 783 aa19.4■□□□□ 0.7
DFFA-203ENST00000476658 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
DFFA-203ENST00000476658 NBPF5PQ86XG9 351 aaPredicted RBP19.4■□□□□ 0.7
DFFA-203ENST00000476658 CCDC24Q8N4L8 307 aa19.4■□□□□ 0.7
DFFA-203ENST00000476658 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
DFFA-203ENST00000476658 YBX3P16989 372 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■■■□□ 16.3
DFFA-203ENST00000476658 GPTP24298 496 aa19.39■□□□□ 0.69
DFFA-203ENST00000476658 GIGYF2Q6Y7W6 1299 aaKnown RBP19.39■□□□□ 0.69
DFFA-203ENST00000476658 ZNF521Q96K83 1311 aa19.39■□□□□ 0.69
DFFA-203ENST00000476658 ATP10DQ9P241 1426 aa19.39■□□□□ 0.69
DFFA-203ENST00000476658 CHD4Q14839 1912 aa19.39■□□□□ 0.69
DFFA-203ENST00000476658 CHRNA5P30532 468 aa19.38■□□□□ 0.69
DFFA-203ENST00000476658 ST5P78524 1137 aa19.38■□□□□ 0.69
DFFA-203ENST00000476658 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
DFFA-203ENST00000476658 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
DFFA-203ENST00000476658 TPTE2Q6XPS3 522 aa19.37■□□□□ 0.69
DFFA-203ENST00000476658 CACNA1FO60840 1977 aa19.37■□□□□ 0.69
DFFA-203ENST00000476658 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
DFFA-203ENST00000476658 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
DFFA-203ENST00000476658 GTF2E1P29083 439 aaPredicted RBP19.36■□□□□ 0.69
DFFA-203ENST00000476658 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
DFFA-203ENST00000476658 ARFGEF2Q9Y6D5 1785 aa19.36■□□□□ 0.69
DFFA-203ENST00000476658 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 KCNA3P22001 575 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 PDE6BP35913 854 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 C2CD5Q86YS7 1000 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
DFFA-203ENST00000476658 PIM2Q9P1W9 311 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 BCS1LQ9Y276 419 aa19.35■□□□□ 0.69
DFFA-203ENST00000476658 UBN2Q6ZU65 1347 aa19.34■□□□□ 0.69
DFFA-203ENST00000476658 H0YIN7 160 aa19.34■□□□□ 0.69
DFFA-203ENST00000476658 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
DFFA-203ENST00000476658 NYXQ9GZU5 481 aa19.34■□□□□ 0.69
DFFA-203ENST00000476658 COL11A2P13942 1736 aaPredicted RBP19.34■□□□□ 0.69
DFFA-203ENST00000476658 ARFGEF1Q9Y6D6 1849 aa19.33■□□□□ 0.69
DFFA-203ENST00000476658 CACNA1SQ13698 1873 aa19.33■□□□□ 0.68
DFFA-203ENST00000476658 UTRNP46939 3433 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 E9PSI1 815 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 VAMP4O75379 141 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 TCIRG1Q13488 830 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 PARP10Q53GL7 1025 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 DALRD3Q5D0E6 543 aaKnown RBP19.32■□□□□ 0.68
DFFA-203ENST00000476658 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 RIC3Q7Z5B4 369 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 NUTM1Q86Y26 1132 aa19.32■□□□□ 0.68
DFFA-203ENST00000476658 PPP1R42Q7Z4L9 355 aa19.31■□□□□ 0.68
DFFA-203ENST00000476658 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
DFFA-203ENST00000476658 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
DFFA-203ENST00000476658 DDX58O95786 925 aaKnown RBP19.3■□□□□ 0.68
DFFA-203ENST00000476658 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
DFFA-203ENST00000476658 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
DFFA-203ENST00000476658 ZNF622Q969S3 477 aaKnown RBP eCLIP19.3■□□□□ 0.68
DFFA-203ENST00000476658 NTSR2O95665 410 aa19.29■□□□□ 0.68
DFFA-203ENST00000476658 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
DFFA-203ENST00000476658 NLRP10Q86W26 655 aa19.29■□□□□ 0.68
DFFA-203ENST00000476658 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
DFFA-203ENST00000476658 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
DFFA-203ENST00000476658 TNRC6CQ9HCJ0 1690 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms