RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TOMM70O94826 608 aa21.29■■□□□ 1
COL1A1-205ENST00000476387 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
COL1A1-205ENST00000476387 LMNB1P20700 586 aa21.28■■□□□ 1
COL1A1-205ENST00000476387 RASSF7Q02833 373 aa21.28■■□□□ 1
COL1A1-205ENST00000476387 LMOD3Q0VAK6 560 aa21.28■■□□□ 1
COL1A1-205ENST00000476387 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
COL1A1-205ENST00000476387 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 1
COL1A1-205ENST00000476387 RIPK4P57078 832 aa21.27■■□□□ 1
COL1A1-205ENST00000476387 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
COL1A1-205ENST00000476387 RUNDC1Q96C34 613 aa21.27■■□□□ 1
COL1A1-205ENST00000476387 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-205ENST00000476387 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
COL1A1-205ENST00000476387 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
COL1A1-205ENST00000476387 NBPF5PQ86XG9 351 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-205ENST00000476387 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
COL1A1-205ENST00000476387 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
COL1A1-205ENST00000476387 NFKBIEO00221 500 aa21.25■□□□□ 0.99
COL1A1-205ENST00000476387 SRGNP10124 158 aa21.25■□□□□ 0.99
COL1A1-205ENST00000476387 CNKSR1Q969H4 720 aa21.25■□□□□ 0.99
COL1A1-205ENST00000476387 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
COL1A1-205ENST00000476387 TPTE2Q6XPS3 522 aa21.24■□□□□ 0.99
COL1A1-205ENST00000476387 RBM46Q8TBY0 533 aaKnown RBP21.24■□□□□ 0.99
COL1A1-205ENST00000476387 MASTLQ96GX5 879 aa21.24■□□□□ 0.99
COL1A1-205ENST00000476387 NIP7Q9Y221 180 aaKnown RBP eCLIP21.24■□□□□ 0.99
COL1A1-205ENST00000476387 ANP32CO43423 234 aa21.23■□□□□ 0.99
COL1A1-205ENST00000476387 PRELPP51888 382 aa21.23■□□□□ 0.99
COL1A1-205ENST00000476387 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
COL1A1-205ENST00000476387 TNRC6CQ9HCJ0 1690 aaKnown RBP21.22■□□□□ 0.99
COL1A1-205ENST00000476387 ERVV-1B6SEH8 477 aa21.22■□□□□ 0.99
COL1A1-205ENST00000476387 C21orf2O43822 256 aa21.22■□□□□ 0.99
COL1A1-205ENST00000476387 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
COL1A1-205ENST00000476387 C16orf71Q8IYS4 520 aaPredicted RBP21.22■□□□□ 0.99
COL1A1-205ENST00000476387 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
COL1A1-205ENST00000476387 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
COL1A1-205ENST00000476387 KLRG2A4D1S0 409 aaPredicted RBP21.21■□□□□ 0.99
COL1A1-205ENST00000476387 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
COL1A1-205ENST00000476387 LTBP3Q9NS15 1303 aa21.21■□□□□ 0.99
COL1A1-205ENST00000476387 APLP1P51693 650 aa21.2■□□□□ 0.98
COL1A1-205ENST00000476387 HLFQ16534 295 aa21.2■□□□□ 0.98
COL1A1-205ENST00000476387 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
COL1A1-205ENST00000476387 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
COL1A1-205ENST00000476387 ARFGEF2Q9Y6D5 1785 aa21.2■□□□□ 0.98
COL1A1-205ENST00000476387 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
COL1A1-205ENST00000476387 GLTPD2A6NH11 291 aa21.19■□□□□ 0.98
COL1A1-205ENST00000476387 NPR1P16066 1061 aa21.19■□□□□ 0.98
COL1A1-205ENST00000476387 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
COL1A1-205ENST00000476387 RRAGCQ9HB90 399 aa21.19■□□□□ 0.98
COL1A1-205ENST00000476387 MAP3K15Q6ZN16 1313 aa21.19■□□□□ 0.98
COL1A1-205ENST00000476387 SLX4Q8IY92 1834 aa21.18■□□□□ 0.98
COL1A1-205ENST00000476387 FSTL1Q12841 308 aa21.18■□□□□ 0.98
COL1A1-205ENST00000476387 TAOK3Q9H2K8 898 aa21.18■□□□□ 0.98
COL1A1-205ENST00000476387 ZNF219Q9P2Y4 722 aaPredicted RBP21.18■□□□□ 0.98
COL1A1-205ENST00000476387 TIAM2Q8IVF5 1701 aa21.18■□□□□ 0.98
COL1A1-205ENST00000476387 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
COL1A1-205ENST00000476387 NYXQ9GZU5 481 aa21.17■□□□□ 0.98
COL1A1-205ENST00000476387 CCDC88AQ3V6T2 1871 aa21.17■□□□□ 0.98
COL1A1-205ENST00000476387 MYL6BP14649 208 aa21.16■□□□□ 0.98
COL1A1-205ENST00000476387 C7orf43Q8WVR3 580 aa21.16■□□□□ 0.98
COL1A1-205ENST00000476387 IBTKQ9P2D0 1353 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-205ENST00000476387 GTF2E1P29083 439 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-205ENST00000476387 ERFEQ4G0M1 354 aa21.15■□□□□ 0.98
COL1A1-205ENST00000476387 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
COL1A1-205ENST00000476387 DICER1Q9UPY3 1922 aaKnown RBP21.15■□□□□ 0.98
COL1A1-205ENST00000476387 NUP98P52948 1817 aa21.14■□□□□ 0.97
COL1A1-205ENST00000476387 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
COL1A1-205ENST00000476387 VEGFAP15692 232 aaPredicted RBP21.14■□□□□ 0.97
COL1A1-205ENST00000476387 DPY19L2Q6NUT2 758 aa21.14■□□□□ 0.97
COL1A1-205ENST00000476387 TRIM35Q9UPQ4 493 aa21.14■□□□□ 0.97
COL1A1-205ENST00000476387 CCDC93Q567U6 631 aa21.13■□□□□ 0.97
COL1A1-205ENST00000476387 MRS2Q9HD23 443 aa21.13■□□□□ 0.97
COL1A1-205ENST00000476387 CACNA1SQ13698 1873 aa21.13■□□□□ 0.97
COL1A1-205ENST00000476387 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 APAF1O14727 1248 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 CRY2Q49AN0 593 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 CCDC184Q52MB2 194 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 GIGYF2Q6Y7W6 1299 aaKnown RBP21.12■□□□□ 0.97
COL1A1-205ENST00000476387 LRP10Q7Z4F1 713 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
COL1A1-205ENST00000476387 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
COL1A1-205ENST00000476387 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
COL1A1-205ENST00000476387 PDIA6Q15084 440 aa21.11■□□□□ 0.97
COL1A1-205ENST00000476387 ABCC12Q96J65 1359 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 UBN2Q6ZU65 1347 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 WDR90Q96KV7 1748 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 CHL1O00533 1208 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 ZNF34Q8IZ26 560 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 RTKN2Q8IZC4 609 aa21.1■□□□□ 0.97
COL1A1-205ENST00000476387 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
COL1A1-205ENST00000476387 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
COL1A1-205ENST00000476387 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
COL1A1-205ENST00000476387 GPTP24298 496 aa21.08■□□□□ 0.97
COL1A1-205ENST00000476387 FKBP4Q02790 459 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL1A1-205ENST00000476387 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.97
COL1A1-205ENST00000476387 SUSD4Q5VX71 490 aa21.08■□□□□ 0.97
COL1A1-205ENST00000476387 DNAJC5GQ8N7S2 189 aa21.08■□□□□ 0.97
COL1A1-205ENST00000476387 POTECB2RU33 542 aa21.07■□□□□ 0.96
COL1A1-205ENST00000476387 PPP1R42Q7Z4L9 355 aa21.07■□□□□ 0.96
COL1A1-205ENST00000476387 NTSR2O95665 410 aa21.06■□□□□ 0.96
COL1A1-205ENST00000476387 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms