RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 SRGNP10124 158 aa17.46■□□□□ 0.39
C1GALT1-207ENST00000476068 SOGA3Q5TF21 947 aa17.46■□□□□ 0.39
C1GALT1-207ENST00000476068 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
C1GALT1-207ENST00000476068 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
C1GALT1-207ENST00000476068 ABT1Q9ULW3 272 aaKnown RBP17.46■□□□□ 0.39
C1GALT1-207ENST00000476068 A0A087WZG4 1122 aa17.45■□□□□ 0.38
C1GALT1-207ENST00000476068 CNBD1Q8NA66 436 aa17.45■□□□□ 0.38
C1GALT1-207ENST00000476068 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
C1GALT1-207ENST00000476068 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
C1GALT1-207ENST00000476068 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
C1GALT1-207ENST00000476068 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
C1GALT1-207ENST00000476068 MASTLQ96GX5 879 aa17.44■□□□□ 0.38
C1GALT1-207ENST00000476068 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
C1GALT1-207ENST00000476068 NPHP1O15259 732 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 STARD3NLO95772 234 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 IL13P35225 146 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 TRPM7Q96QT4 1865 aa17.43■□□□□ 0.38
C1GALT1-207ENST00000476068 ST5P78524 1137 aa17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 CAPNS2Q96L46 248 aa17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 TNRC18O15417 2968 aaPredicted RBP17.42■□□□□ 0.38
C1GALT1-207ENST00000476068 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.382e-9■■■■□ 22.4
C1GALT1-207ENST00000476068 FMR1Q06787 632 aaKnown RBP eCLIP17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 GRM1Q13255 1194 aa17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 SETDB2Q96T68 719 aa17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 PDE4DIPQ5VU43 2346 aa17.41■□□□□ 0.38
C1GALT1-207ENST00000476068 CASP8AP2Q9UKL3 1982 aa17.4■□□□□ 0.38
C1GALT1-207ENST00000476068 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
C1GALT1-207ENST00000476068 BEGAINQ9BUH8 593 aa17.4■□□□□ 0.38
C1GALT1-207ENST00000476068 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 CAMTA2O94983 1202 aa17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 ZNF496Q96IT1 587 aaPredicted RBP17.39■□□□□ 0.37
C1GALT1-207ENST00000476068 FZD9O00144 591 aa17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 HMOX1P09601 288 aa17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 PANK3Q9H999 370 aa17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
C1GALT1-207ENST00000476068 ECE1P42892 770 aa17.37■□□□□ 0.37
C1GALT1-207ENST00000476068 MCOLN1Q9GZU1 580 aa17.37■□□□□ 0.37
C1GALT1-207ENST00000476068 COL4A5P29400 1685 aa17.36■□□□□ 0.37
C1GALT1-207ENST00000476068 A1BGP04217 495 aa17.36■□□□□ 0.37
C1GALT1-207ENST00000476068 NPR1P16066 1061 aa17.36■□□□□ 0.37
C1GALT1-207ENST00000476068 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
C1GALT1-207ENST00000476068 GPC2Q8N158 579 aa17.36■□□□□ 0.37
C1GALT1-207ENST00000476068 AOC2O75106 756 aa17.35■□□□□ 0.37
C1GALT1-207ENST00000476068 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
C1GALT1-207ENST00000476068 TRAF5O00463 557 aa17.34■□□□□ 0.37
C1GALT1-207ENST00000476068 CST9Q5W186 159 aa17.34■□□□□ 0.37
C1GALT1-207ENST00000476068 DZIP3Q86Y13 1208 aaKnown RBP17.34■□□□□ 0.37
C1GALT1-207ENST00000476068 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
C1GALT1-207ENST00000476068 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
C1GALT1-207ENST00000476068 SNED1Q8TER0 1413 aa17.33■□□□□ 0.36
C1GALT1-207ENST00000476068 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
C1GALT1-207ENST00000476068 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
C1GALT1-207ENST00000476068 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
C1GALT1-207ENST00000476068 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
C1GALT1-207ENST00000476068 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
C1GALT1-207ENST00000476068 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
C1GALT1-207ENST00000476068 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
C1GALT1-207ENST00000476068 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
C1GALT1-207ENST00000476068 EPS15P42566 896 aa17.31■□□□□ 0.36
C1GALT1-207ENST00000476068 SCNN1DP51172 638 aa17.31■□□□□ 0.36
C1GALT1-207ENST00000476068 MAP2K2P36507 400 aa17.3■□□□□ 0.36
C1GALT1-207ENST00000476068 DGKZQ13574 1117 aa17.3■□□□□ 0.36
C1GALT1-207ENST00000476068 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
C1GALT1-207ENST00000476068 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
C1GALT1-207ENST00000476068 TEFQ10587 303 aa17.29■□□□□ 0.36
C1GALT1-207ENST00000476068 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
C1GALT1-207ENST00000476068 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
C1GALT1-207ENST00000476068 PSMD1Q99460 953 aa17.28■□□□□ 0.36
C1GALT1-207ENST00000476068 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
C1GALT1-207ENST00000476068 KCNQ3O43525 872 aa17.27■□□□□ 0.36
C1GALT1-207ENST00000476068 CA12O43570 354 aa17.27■□□□□ 0.36
C1GALT1-207ENST00000476068 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
C1GALT1-207ENST00000476068 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
C1GALT1-207ENST00000476068 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
C1GALT1-207ENST00000476068 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
C1GALT1-207ENST00000476068 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
C1GALT1-207ENST00000476068 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
C1GALT1-207ENST00000476068 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
C1GALT1-207ENST00000476068 CELF2O95319 508 aaKnown RBP17.24■□□□□ 0.35
C1GALT1-207ENST00000476068 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms