RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 ZNF853P0CG23 659 aa15.06■□□□□ 0
BRD9-203ENST00000475706 CHRNA5P30532 468 aa15.06■□□□□ 0
BRD9-203ENST00000475706 HLFQ16534 295 aa15.06■□□□□ 0
BRD9-203ENST00000475706 CLEC4GQ6UXB4 293 aa15.06■□□□□ 0
BRD9-203ENST00000475706 CCDC24Q8N4L8 307 aa15.06■□□□□ 0
BRD9-203ENST00000475706 BCS1LQ9Y276 419 aa15.06■□□□□ 0
BRD9-203ENST00000475706 CACNA1SQ13698 1873 aa15.06■□□□□ 0
BRD9-203ENST00000475706 FAM177BA6PVY3 158 aa15.05■□□□□ -0
BRD9-203ENST00000475706 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
BRD9-203ENST00000475706 DUSP27Q5VZP5 1158 aa15.05■□□□□ -0
BRD9-203ENST00000475706 WWC1Q8IX03 1113 aa15.05■□□□□ -0
BRD9-203ENST00000475706 ZBTB3Q9H5J0 574 aa15.05■□□□□ -0
BRD9-203ENST00000475706 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
BRD9-203ENST00000475706 CARMIL3Q8ND23 1372 aa15.05■□□□□ -0
BRD9-203ENST00000475706 ARFGEF1Q9Y6D6 1849 aa15.04■□□□□ -0
BRD9-203ENST00000475706 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
BRD9-203ENST00000475706 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
BRD9-203ENST00000475706 PDIA6Q15084 440 aa15.04■□□□□ -0
BRD9-203ENST00000475706 CCDC27Q2M243 656 aa15.04■□□□□ -0
BRD9-203ENST00000475706 PROSER3Q2NL68 480 aa15.04■□□□□ -0
BRD9-203ENST00000475706 HDGFL1Q5TGJ6 251 aa15.04■□□□□ -0
BRD9-203ENST00000475706 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
BRD9-203ENST00000475706 PIM2Q9P1W9 311 aa15.04■□□□□ -0
BRD9-203ENST00000475706 NBPF5PQ86XG9 351 aaPredicted RBP15.03■□□□□ -0
BRD9-203ENST00000475706 C2CD5Q86YS7 1000 aa15.03■□□□□ -0
BRD9-203ENST00000475706 CNBD1Q8NA66 436 aa15.03■□□□□ -0
BRD9-203ENST00000475706 ERVV-1B6SEH8 477 aa15.02■□□□□ -0
BRD9-203ENST00000475706 HOXB7P09629 217 aa15.02■□□□□ -0
BRD9-203ENST00000475706 KCNA3P22001 575 aa15.02■□□□□ -0
BRD9-203ENST00000475706 ST5P78524 1137 aa15.02■□□□□ -0
BRD9-203ENST00000475706 COPS6Q7L5N1 327 aa15.02■□□□□ -0
BRD9-203ENST00000475706 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
BRD9-203ENST00000475706 TSR2Q969E8 191 aaKnown RBP15.02■□□□□ -0
BRD9-203ENST00000475706 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
BRD9-203ENST00000475706 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
BRD9-203ENST00000475706 DLEC1Q9Y238 1755 aa15.02□□□□□ -0.01
BRD9-203ENST00000475706 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
BRD9-203ENST00000475706 H0YIN7 160 aa15.01□□□□□ -0.01
BRD9-203ENST00000475706 GPTP24298 496 aa15.01□□□□□ -0.01
BRD9-203ENST00000475706 GTF2E1P29083 439 aaPredicted RBP15.01□□□□□ -0.01
BRD9-203ENST00000475706 DALRD3Q5D0E6 543 aaKnown RBP15.01□□□□□ -0.01
BRD9-203ENST00000475706 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
BRD9-203ENST00000475706 CCDC88AQ3V6T2 1871 aa15.01□□□□□ -0.01
BRD9-203ENST00000475706 RGL2O15211 777 aa15□□□□□ -0.01
BRD9-203ENST00000475706 PDE6BP35913 854 aa15□□□□□ -0.01
BRD9-203ENST00000475706 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
BRD9-203ENST00000475706 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
BRD9-203ENST00000475706 ARHGAP27Q6ZUM4 889 aa15□□□□□ -0.01
BRD9-203ENST00000475706 LRP10Q7Z4F1 713 aa15□□□□□ -0.01
BRD9-203ENST00000475706 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.012e-10■□□□□ 9.9
BRD9-203ENST00000475706 BRIP1Q9BX63 1249 aa15□□□□□ -0.01
BRD9-203ENST00000475706 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
BRD9-203ENST00000475706 DBF4Q9UBU7 674 aaPredicted RBP14.99□□□□□ -0.01
BRD9-203ENST00000475706 COL11A2P13942 1736 aaPredicted RBP14.99□□□□□ -0.01
BRD9-203ENST00000475706 CACNA1FO60840 1977 aa14.98□□□□□ -0.01
BRD9-203ENST00000475706 IL16Q14005 1332 aa14.98□□□□□ -0.01
BRD9-203ENST00000475706 DIEXFQ68CQ4 756 aaKnown RBP14.98□□□□□ -0.01
BRD9-203ENST00000475706 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
BRD9-203ENST00000475706 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 ZNF34Q8IZ26 560 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 TSPYL6Q8N831 410 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 NYXQ9GZU5 481 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 HYPKQ9NX55 129 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
BRD9-203ENST00000475706 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
BRD9-203ENST00000475706 SBF1O95248 1867 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 CCDC30Q5VVM6 783 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 SUSD4Q5VX71 490 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 ATP10DQ9P241 1426 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
BRD9-203ENST00000475706 SLX4Q8IY92 1834 aa14.96□□□□□ -0.01
BRD9-203ENST00000475706 UBN2Q6ZU65 1347 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
BRD9-203ENST00000475706 ERFEQ4G0M1 354 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 ANKRD13DQ6ZTN6 518 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
BRD9-203ENST00000475706 ARFGEF2Q9Y6D5 1785 aa14.95□□□□□ -0.02
BRD9-203ENST00000475706 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
BRD9-203ENST00000475706 PARP10Q53GL7 1025 aa14.94□□□□□ -0.02
BRD9-203ENST00000475706 PLBD2Q8NHP8 589 aa14.94□□□□□ -0.02
BRD9-203ENST00000475706 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
BRD9-203ENST00000475706 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 TCIRG1Q13488 830 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 RIC3Q7Z5B4 369 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 CNKSR1Q969H4 720 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 ZNF428Q96B54 188 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 MASTLQ96GX5 879 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 UTP14AQ9BVJ6 771 aaKnown RBP14.93□□□□□ -0.02
BRD9-203ENST00000475706 STK31Q9BXU1 1019 aa14.93□□□□□ -0.02
BRD9-203ENST00000475706 TNRC6CQ9HCJ0 1690 aaKnown RBP14.93□□□□□ -0.02
BRD9-203ENST00000475706 NTSR2O95665 410 aa14.92□□□□□ -0.02
BRD9-203ENST00000475706 SRGNP10124 158 aa14.92□□□□□ -0.02
BRD9-203ENST00000475706 STYK1Q6J9G0 422 aa14.92□□□□□ -0.02
BRD9-203ENST00000475706 MIER1Q8N108 512 aa14.92□□□□□ -0.02
BRD9-203ENST00000475706 ZNF784Q8NCA9 323 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms