RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ZNF521Q96K83 1311 aa21.03■□□□□ 0.96
SRM-204ENST00000475189 RGL2O15211 777 aa21.02■□□□□ 0.96
SRM-204ENST00000475189 SERPINB2P05120 415 aa21.02■□□□□ 0.96
SRM-204ENST00000475189 HLFQ16534 295 aa21.02■□□□□ 0.96
SRM-204ENST00000475189 SPINK5Q9NQ38 1064 aaPredicted RBP21.02■□□□□ 0.96
SRM-204ENST00000475189 CHPF2Q9P2E5 772 aa21.02■□□□□ 0.96
SRM-204ENST00000475189 N4BP2Q86UW6 1770 aaPredicted RBP21.02■□□□□ 0.96
SRM-204ENST00000475189 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
SRM-204ENST00000475189 ERVV-1B6SEH8 477 aa21.01■□□□□ 0.95
SRM-204ENST00000475189 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
SRM-204ENST00000475189 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
SRM-204ENST00000475189 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
SRM-204ENST00000475189 FANCIQ9NVI1 1328 aa21■□□□□ 0.95
SRM-204ENST00000475189 SETDB2Q96T68 719 aa20.99■□□□□ 0.95
SRM-204ENST00000475189 ZBTB3Q9H5J0 574 aa20.99■□□□□ 0.95
SRM-204ENST00000475189 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
SRM-204ENST00000475189 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
SRM-204ENST00000475189 TGFB2P61812 414 aa20.98■□□□□ 0.95
SRM-204ENST00000475189 COPS6Q7L5N1 327 aa20.98■□□□□ 0.95
SRM-204ENST00000475189 XAGE3Q8WTP9 111 aa20.98■□□□□ 0.95
SRM-204ENST00000475189 PXDNLA1KZ92 1463 aa20.97■□□□□ 0.95
SRM-204ENST00000475189 AIMP1Q12904 312 aaKnown RBP20.97■□□□□ 0.95
SRM-204ENST00000475189 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
SRM-204ENST00000475189 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
SRM-204ENST00000475189 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
SRM-204ENST00000475189 HYPKQ9NX55 129 aa20.96■□□□□ 0.95
SRM-204ENST00000475189 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
SRM-204ENST00000475189 ANKRD31Q8N7Z5 1873 aa20.96■□□□□ 0.95
SRM-204ENST00000475189 BRCA1P38398 1863 aaKnown RBP20.95■□□□□ 0.94
SRM-204ENST00000475189 A0A0G2JLW4 131 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 GOLGA2Q08379 1002 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 PRR5LQ6MZQ0 368 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 MYH16Q9H6N6 1097 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 ATP10DQ9P241 1426 aa20.95■□□□□ 0.94
SRM-204ENST00000475189 DPEP1P16444 411 aa20.94■□□□□ 0.94
SRM-204ENST00000475189 EXOSC9Q06265 439 aaKnown RBP20.94■□□□□ 0.94
SRM-204ENST00000475189 GPR162Q16538 588 aa20.94■□□□□ 0.94
SRM-204ENST00000475189 CHMP4AQ9BY43 222 aa20.94■□□□□ 0.94
SRM-204ENST00000475189 ANKRD36CQ5JPF3 1778 aa20.93■□□□□ 0.94
SRM-204ENST00000475189 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
SRM-204ENST00000475189 CACNA1FO60840 1977 aa20.93■□□□□ 0.94
SRM-204ENST00000475189 YBX3P16989 372 aaKnown RBP eCLIP20.92■□□□□ 0.942e-11■■□□□ 12.3
SRM-204ENST00000475189 KCNA3P22001 575 aa20.92■□□□□ 0.94
SRM-204ENST00000475189 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
SRM-204ENST00000475189 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
SRM-204ENST00000475189 CCDC24Q8N4L8 307 aa20.92■□□□□ 0.94
SRM-204ENST00000475189 CNBD1Q8NA66 436 aa20.92■□□□□ 0.94
SRM-204ENST00000475189 PHAXQ9H814 394 aaKnown RBP20.92■□□□□ 0.94
SRM-204ENST00000475189 VAMP4O75379 141 aa20.91■□□□□ 0.94
SRM-204ENST00000475189 GPTP24298 496 aa20.91■□□□□ 0.94
SRM-204ENST00000475189 WWC3Q9ULE0 1092 aa20.91■□□□□ 0.94
SRM-204ENST00000475189 DLEC1Q9Y238 1755 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 UBN2Q6ZU65 1347 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
SRM-204ENST00000475189 CHRNA5P30532 468 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 ANKRD13DQ6ZTN6 518 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 PLBD2Q8NHP8 589 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 ARFGEF2Q9Y6D5 1785 aa20.9■□□□□ 0.94
SRM-204ENST00000475189 E9PSI1 815 aa20.89■□□□□ 0.93
SRM-204ENST00000475189 YY1P25490 414 aa20.89■□□□□ 0.93
SRM-204ENST00000475189 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
SRM-204ENST00000475189 TPTE2Q6XPS3 522 aa20.89■□□□□ 0.93
SRM-204ENST00000475189 NPHP1O15259 732 aa20.88■□□□□ 0.93
SRM-204ENST00000475189 ST5P78524 1137 aa20.88■□□□□ 0.93
SRM-204ENST00000475189 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
SRM-204ENST00000475189 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
SRM-204ENST00000475189 CHD4Q14839 1912 aa20.88■□□□□ 0.93
SRM-204ENST00000475189 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
SRM-204ENST00000475189 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
SRM-204ENST00000475189 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
SRM-204ENST00000475189 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
SRM-204ENST00000475189 ARFGEF1Q9Y6D6 1849 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 PDE6BP35913 854 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 PARP10Q53GL7 1025 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 C2CD5Q86YS7 1000 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 NYXQ9GZU5 481 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
SRM-204ENST00000475189 IBTKQ9P2D0 1353 aaPredicted RBP20.85■□□□□ 0.93
SRM-204ENST00000475189 GOLGB1Q14789 3259 aaKnown RBP20.85■□□□□ 0.93
SRM-204ENST00000475189 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
SRM-204ENST00000475189 H0YIN7 160 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 NTSR2O95665 410 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
SRM-204ENST00000475189 G2E3Q7L622 706 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 RIC3Q7Z5B4 369 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 NUTM1Q86Y26 1132 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 TRMT2AQ8IZ69 625 aaKnown RBP20.84■□□□□ 0.93
SRM-204ENST00000475189 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 UTRNP46939 3433 aa20.84■□□□□ 0.93
SRM-204ENST00000475189 ERFEQ4G0M1 354 aa20.83■□□□□ 0.93
SRM-204ENST00000475189 ISCA1Q9BUE6 129 aa20.83■□□□□ 0.93
SRM-204ENST00000475189 KLRG2A4D1S0 409 aaPredicted RBP20.82■□□□□ 0.92
SRM-204ENST00000475189 DDX58O95786 925 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms