RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 COL16A1Q07092 1604 aaPredicted RBP26.69■■□□□ 1.86
CCM2-206ENST00000474617 DDX54Q8TDD1 881 aaKnown RBP26.68■■□□□ 1.86
CCM2-206ENST00000474617 GPATCH3Q96I76 525 aa26.68■■□□□ 1.86
CCM2-206ENST00000474617 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
CCM2-206ENST00000474617 ARFGEF2Q9Y6D5 1785 aa26.67■■□□□ 1.86
CCM2-206ENST00000474617 CLASRPQ8N2M8 674 aaKnown RBP26.67■■□□□ 1.86
CCM2-206ENST00000474617 OS9Q13438 667 aaPredicted RBP26.65■■□□□ 1.86
CCM2-206ENST00000474617 RABEP1Q15276 862 aa26.65■■□□□ 1.86
CCM2-206ENST00000474617 MYD88Q99836 296 aa26.65■■□□□ 1.86
CCM2-206ENST00000474617 USP26Q9BXU7 913 aa26.65■■□□□ 1.86
CCM2-206ENST00000474617 WNK3Q9BYP7 1800 aa26.64■■□□□ 1.86
CCM2-206ENST00000474617 TOGARAM1Q9Y4F4 1720 aa26.64■■□□□ 1.86
CCM2-206ENST00000474617 SUCLG2Q96I99 432 aa26.64■■□□□ 1.85
CCM2-206ENST00000474617 PHLPP1O60346 1717 aa26.63■■□□□ 1.85
CCM2-206ENST00000474617 GLRX3O76003 335 aaKnown RBP26.62■■□□□ 1.85
CCM2-206ENST00000474617 BICC1Q9H694 974 aaKnown RBP26.62■■□□□ 1.85
CCM2-206ENST00000474617 G3BP1Q13283 466 aaKnown RBP eCLIP26.61■■□□□ 1.85
CCM2-206ENST00000474617 NBR1Q14596 966 aa26.61■■□□□ 1.85
CCM2-206ENST00000474617 EXOC5O00471 708 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 TOM1O60784 492 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 RABL6Q3YEC7 729 aaPredicted RBP26.6■■□□□ 1.85
CCM2-206ENST00000474617 KIF2CQ99661 725 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 ANTXR1Q9H6X2 564 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 AFDNP55196 1824 aaKnown RBP26.6■■□□□ 1.85
CCM2-206ENST00000474617 MCCP23508 829 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 CNTROBQ8N137 903 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 KAZALD1Q96I82 304 aa26.6■■□□□ 1.85
CCM2-206ENST00000474617 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
CCM2-206ENST00000474617 STARD3NLO95772 234 aa26.59■■□□□ 1.85
CCM2-206ENST00000474617 IL1RAPL2Q9NP60 686 aa26.59■■□□□ 1.85
CCM2-206ENST00000474617 TRIM6-TRIM34B2RNG4 842 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 NBPF26B4DH59 902 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 NBPF14Q5TI25 921 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 NBPF10Q6P3W6 841 aaKnown RBP26.58■■□□□ 1.85
CCM2-206ENST00000474617 NBPF15Q8N660 670 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 CCDC191Q8NCU4 936 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 ESYT1Q9BSJ8 1104 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 COPRSQ9NQ92 184 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 NWD2Q9ULI1 1742 aa26.58■■□□□ 1.85
CCM2-206ENST00000474617 PI4K2BQ8TCG2 481 aa26.57■■□□□ 1.84
CCM2-206ENST00000474617 CIZ1Q9ULV3 898 aaPredicted RBP26.57■■□□□ 1.84
CCM2-206ENST00000474617 BCL9O00512 1426 aa26.56■■□□□ 1.84
CCM2-206ENST00000474617 IFIT2P09913 472 aaKnown RBP26.56■■□□□ 1.84
CCM2-206ENST00000474617 CHMLP26374 656 aa26.56■■□□□ 1.84
CCM2-206ENST00000474617 ANAPC15P60006 121 aa26.56■■□□□ 1.84
CCM2-206ENST00000474617 ECHDC1Q9NTX5 307 aa26.56■■□□□ 1.84
CCM2-206ENST00000474617 NRAPQ86VF7 1730 aa26.56■■□□□ 1.84
CCM2-206ENST00000474617 NFKBIBQ15653 356 aa26.55■■□□□ 1.84
CCM2-206ENST00000474617 CWC25Q9NXE8 425 aaPredicted RBP26.55■■□□□ 1.84
CCM2-206ENST00000474617 CHMP5Q9NZZ3 219 aa26.55■■□□□ 1.84
CCM2-206ENST00000474617 IL17RAQ96F46 866 aa26.55■■□□□ 1.84
CCM2-206ENST00000474617 BCL11AQ9H165 835 aa26.55■■□□□ 1.84
CCM2-206ENST00000474617 ITGB4P16144 1822 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 A0A087WZG4 1122 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 H7C1W4 665 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 TRIM28Q13263 835 aaKnown RBP26.54■■□□□ 1.84
CCM2-206ENST00000474617 NUTM1Q86Y26 1132 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 PIGBQ92521 554 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 RILPL2Q969X0 211 aa26.54■■□□□ 1.84
CCM2-206ENST00000474617 K7ELQ4 463 aaPredicted RBP26.53■■□□□ 1.84
CCM2-206ENST00000474617 PTCD1O75127 700 aaKnown RBP26.53■■□□□ 1.84
CCM2-206ENST00000474617 ST18O60284 1047 aa26.52■■□□□ 1.84
CCM2-206ENST00000474617 SPATA31A1Q5TZJ5 1347 aa26.52■■□□□ 1.84
CCM2-206ENST00000474617 AK9Q5TCS8 1911 aa26.51■■□□□ 1.83
CCM2-206ENST00000474617 HIP1O00291 1037 aa26.51■■□□□ 1.83
CCM2-206ENST00000474617 CASP7P55210 303 aa26.51■■□□□ 1.83
CCM2-206ENST00000474617 ATG3Q9NT62 314 aa26.51■■□□□ 1.83
CCM2-206ENST00000474617 KIF6Q6ZMV9 814 aa26.5■■□□□ 1.83
CCM2-206ENST00000474617 UBE3BQ7Z3V4 1068 aa26.5■■□□□ 1.83
CCM2-206ENST00000474617 RUFY2Q8WXA3 655 aa26.5■■□□□ 1.83
CCM2-206ENST00000474617 MCM2P49736 904 aa26.49■■□□□ 1.83
CCM2-206ENST00000474617 TICAM2Q86XR7 235 aa26.49■■□□□ 1.83
CCM2-206ENST00000474617 A1BGP04217 495 aa26.49■■□□□ 1.83
CCM2-206ENST00000474617 HSP90AB3PQ58FF7 597 aa26.49■■□□□ 1.83
CCM2-206ENST00000474617 BARGINQ6ZT62 677 aa26.49■■□□□ 1.83
CCM2-206ENST00000474617 SLKQ9H2G2 1235 aaPredicted RBP26.49■■□□□ 1.83
CCM2-206ENST00000474617 TSHZ3Q63HK5 1081 aa26.48■■□□□ 1.83
CCM2-206ENST00000474617 AACSQ86V21 672 aa26.48■■□□□ 1.83
CCM2-206ENST00000474617 EVI5LQ96CN4 794 aa26.48■■□□□ 1.83
CCM2-206ENST00000474617 SASH1O94885 1247 aa26.47■■□□□ 1.83
CCM2-206ENST00000474617 PA2G4Q9UQ80 394 aaKnown RBP26.47■■□□□ 1.83
CCM2-206ENST00000474617 SLIT2O94813 1529 aa26.46■■□□□ 1.83
CCM2-206ENST00000474617 RFX5P48382 616 aaPredicted RBP26.46■■□□□ 1.83
CCM2-206ENST00000474617 TTLL7Q6ZT98 887 aa26.46■■□□□ 1.83
CCM2-206ENST00000474617 ISCA1Q9BUE6 129 aa26.46■■□□□ 1.83
CCM2-206ENST00000474617 FBXO3Q9UK99 471 aa26.46■■□□□ 1.83
CCM2-206ENST00000474617 ASAP1Q9ULH1 1129 aa26.46■■□□□ 1.83
CCM2-206ENST00000474617 TCIRG1Q13488 830 aa26.45■■□□□ 1.83
CCM2-206ENST00000474617 PIP4K2AP48426 406 aaPredicted RBP26.44■■□□□ 1.82
CCM2-206ENST00000474617 DDB1Q16531 1140 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 SPATA31A5Q5VU36 1347 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 SPATA31A7Q8IWB4 1347 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 HSP90AA1P07900 732 aaKnown RBP26.44■■□□□ 1.82
CCM2-206ENST00000474617 DDIT3P35638 169 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 PTPN12Q05209 780 aaKnown RBP26.44■■□□□ 1.82
CCM2-206ENST00000474617 TJP1Q07157 1748 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 EPHA10Q5JZY3 1008 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 GPR108Q9NPR9 543 aa26.44■■□□□ 1.82
CCM2-206ENST00000474617 CICQ96RK0 1608 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms