RNA–Protein interactions for RNA: ENST00000473680.1

PNCK-225, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,232 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-225	ENST00000473680	NGEF	Q8N5V2	710 aa		28.63	■■■□□ 2.17
PNCK-225	ENST00000473680	CNKSR1	Q969H4	720 aa		28.63	■■■□□ 2.17
PNCK-225	ENST00000473680	RRAGC	Q9HB90	399 aa		28.63	■■■□□ 2.17
PNCK-225	ENST00000473680	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.63	■■■□□ 2.17
PNCK-225	ENST00000473680	ANKRD31	Q8N7Z5	1873 aa		28.62	■■■□□ 2.17
PNCK-225	ENST00000473680	DLG5	Q8TDM6	1919 aa		28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	NFKBIE	O00221	500 aa		28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	RGL2	O15211	777 aa		28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	EIF4A1	P60842	406 aa	Known RBP	28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	STYK1	Q6J9G0	422 aa		28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	TPTE2	Q6XPS3	522 aa		28.61	■■■□□ 2.17
PNCK-225	ENST00000473680	SBF1	O95248	1867 aa		28.6	■■■□□ 2.17
PNCK-225	ENST00000473680	FAM177B	A6PVY3	158 aa		28.6	■■■□□ 2.17
PNCK-225	ENST00000473680	SRGN	P10124	158 aa		28.6	■■■□□ 2.17
PNCK-225	ENST00000473680	MASTL	Q96GX5	879 aa		28.6	■■■□□ 2.17
PNCK-225	ENST00000473680	RRP7A	Q9Y3A4	280 aa	Known RBP	28.6	■■■□□ 2.17
PNCK-225	ENST00000473680	PRELP	P51888	382 aa		28.59	■■■□□ 2.17
PNCK-225	ENST00000473680	RIPK4	P57078	832 aa		28.59	■■■□□ 2.17
PNCK-225	ENST00000473680	RBM46	Q8TBY0	533 aa	Known RBP	28.59	■■■□□ 2.17
PNCK-225	ENST00000473680	HLF	Q16534	295 aa		28.58	■■■□□ 2.17
PNCK-225	ENST00000473680	TSPYL4	Q9UJ04	414 aa		28.58	■■■□□ 2.17
PNCK-225	ENST00000473680	MYL6B	P14649	208 aa		28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	GTF2E1	P29083	439 aa	Predicted RBP	28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	APLP1	P51693	650 aa		28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	PRPF40B	Q6NWY9	871 aa	Known RBP	28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	COL11A2	P13942	1736 aa	Predicted RBP	28.57	■■■□□ 2.16
PNCK-225	ENST00000473680	KIF6	Q6ZMV9	814 aa		28.56	■■■□□ 2.16
PNCK-225	ENST00000473680	KDM3B	Q7LBC6	1761 aa		28.56	■■■□□ 2.16
PNCK-225	ENST00000473680	LAMB4	A4D0S4	1761 aa		28.55	■■■□□ 2.16
PNCK-225	ENST00000473680	GLTPD2	A6NH11	291 aa		28.55	■■■□□ 2.16
PNCK-225	ENST00000473680	SOGA3	Q5TF21	947 aa		28.55	■■■□□ 2.16
PNCK-225	ENST00000473680	LMOD3	Q0VAK6	560 aa		28.54	■■■□□ 2.16
PNCK-225	ENST00000473680	TAOK3	Q9H2K8	898 aa		28.54	■■■□□ 2.16
PNCK-225	ENST00000473680	ERVV-1	B6SEH8	477 aa		28.53	■■■□□ 2.16
PNCK-225	ENST00000473680	NPR1	P16066	1061 aa		28.53	■■■□□ 2.16
PNCK-225	ENST00000473680	TMPO	P42166	694 aa	Known RBP	28.53	■■■□□ 2.16
PNCK-225	ENST00000473680	ERFE	Q4G0M1	354 aa		28.53	■■■□□ 2.16
PNCK-225	ENST00000473680	MAP3K15	Q6ZN16	1313 aa		28.52	■■■□□ 2.16
PNCK-225	ENST00000473680	FSTL1	Q12841	308 aa		28.52	■■■□□ 2.16
PNCK-225	ENST00000473680	DPY19L2	Q6NUT2	758 aa		28.52	■■■□□ 2.16
PNCK-225	ENST00000473680	WDR43	Q15061	677 aa	Known RBP eCLIP	28.51	■■■□□ 2.15
PNCK-225	ENST00000473680	TTLL7	Q6ZT98	887 aa		28.51	■■■□□ 2.15
PNCK-225	ENST00000473680	NYX	Q9GZU5	481 aa		28.51	■■■□□ 2.15
PNCK-225	ENST00000473680	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.51	■■■□□ 2.15
PNCK-225	ENST00000473680	VEGFA	P15692	232 aa	Predicted RBP	28.5	■■■□□ 2.15
PNCK-225	ENST00000473680	NEUROD2	Q15784	382 aa		28.5	■■■□□ 2.15
PNCK-225	ENST00000473680	CCDC146	Q8IYE0	955 aa		28.5	■■■□□ 2.15
PNCK-225	ENST00000473680	ZBTB3	Q9H5J0	574 aa		28.5	■■■□□ 2.15
PNCK-225	ENST00000473680	LTBP3	Q9NS15	1303 aa		28.49	■■■□□ 2.15
PNCK-225	ENST00000473680	ERBB4	Q15303	1308 aa		28.48	■■■□□ 2.15
PNCK-225	ENST00000473680	KLRG2	A4D1S0	409 aa	Predicted RBP	28.48	■■■□□ 2.15
PNCK-225	ENST00000473680	EIF2S2	P20042	333 aa	Known RBP	28.48	■■■□□ 2.15
PNCK-225	ENST00000473680	BABAM1	Q9NWV8	329 aa		28.48	■■■□□ 2.15
PNCK-225	ENST00000473680	SLX4	Q8IY92	1834 aa		28.48	■■■□□ 2.15
PNCK-225	ENST00000473680	TIAM2	Q8IVF5	1701 aa		28.47	■■■□□ 2.15
PNCK-225	ENST00000473680	CCDC93	Q567U6	631 aa		28.47	■■■□□ 2.15
PNCK-225	ENST00000473680	SMC1B	Q8NDV3	1235 aa		28.47	■■■□□ 2.15
PNCK-225	ENST00000473680	GPT	P24298	496 aa		28.46	■■■□□ 2.15
PNCK-225	ENST00000473680	NUTM1	Q86Y26	1132 aa		28.46	■■■□□ 2.15
PNCK-225	ENST00000473680	CCDC88A	Q3V6T2	1871 aa		28.45	■■■□□ 2.15
PNCK-225	ENST00000473680	ALDH1B1	P30837	517 aa		28.45	■■■□□ 2.14
PNCK-225	ENST00000473680	RUNDC1	Q96C34	613 aa		28.45	■■■□□ 2.14
PNCK-225	ENST00000473680	CACNA1S	Q13698	1873 aa		28.44	■■■□□ 2.14
PNCK-225	ENST00000473680	FER1L6	Q2WGJ9	1857 aa		28.44	■■■□□ 2.14
PNCK-225	ENST00000473680	C7orf43	Q8WVR3	580 aa		28.44	■■■□□ 2.14
PNCK-225	ENST00000473680	LAS1L	Q9Y4W2	734 aa	Known RBP	28.42	■■■□□ 2.14
PNCK-225	ENST00000473680	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.41	■■■□□ 2.14
PNCK-225	ENST00000473680	ARFGEF2	Q9Y6D5	1785 aa		28.41	■■■□□ 2.14
PNCK-225	ENST00000473680	UBN2	Q6ZU65	1347 aa		28.41	■■■□□ 2.14
PNCK-225	ENST00000473680	ABCC12	Q96J65	1359 aa		28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	SUSD4	Q5VX71	490 aa		28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	RTKN2	Q8IZC4	609 aa		28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	NECTIN2	Q92692	538 aa		28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	RPGR	Q92834	1020 aa	Known RBP	28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	ADAMTS8	Q9UP79	889 aa		28.4	■■■□□ 2.14
PNCK-225	ENST00000473680	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.39	■■■□□ 2.14
PNCK-225	ENST00000473680	PDIA6	Q15084	440 aa		28.39	■■■□□ 2.14
PNCK-225	ENST00000473680	OLFM4	Q6UX06	510 aa		28.39	■■■□□ 2.14
PNCK-225	ENST00000473680	ZNF34	Q8IZ26	560 aa		28.39	■■■□□ 2.14
PNCK-225	ENST00000473680	ANXA1	P04083	346 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	HTRA3	P83110	453 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	CRY2	Q49AN0	593 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	PPP1R42	Q7Z4L9	355 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	DNAJC5G	Q8N7S2	189 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	NUP98	P52948	1817 aa		28.38	■■■□□ 2.13
PNCK-225	ENST00000473680	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	DDN	O94850	711 aa	Predicted RBP	28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	PROSER3	Q2NL68	480 aa		28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	PARP10	Q53GL7	1025 aa		28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.37	■■■□□ 2.13
PNCK-225	ENST00000473680	POTEC	B2RU33	542 aa		28.36	■■■□□ 2.13
PNCK-225	ENST00000473680	TRIM35	Q9UPQ4	493 aa		28.36	■■■□□ 2.13
PNCK-225	ENST00000473680	DICER1	Q9UPY3	1922 aa	Known RBP	28.35	■■■□□ 2.13
PNCK-225	ENST00000473680	CHL1	O00533	1208 aa		28.35	■■■□□ 2.13
PNCK-225	ENST00000473680	AIMP1	Q12904	312 aa	Known RBP	28.35	■■■□□ 2.13
PNCK-225	ENST00000473680	LRP10	Q7Z4F1	713 aa		28.35	■■■□□ 2.13
PNCK-225	ENST00000473680	NTSR2	O95665	410 aa		28.34	■■■□□ 2.13
PNCK-225	ENST00000473680	WDR90	Q96KV7	1748 aa		28.34	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms