RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ARXQ96QS3 562 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 ATF5Q9Y2D1 282 aaPredicted RBP24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 ANKRD36CQ5JPF3 1778 aa24.38■■□□□ 1.49
CTDSP1-207ENST00000473420 ARFGEF2Q9Y6D5 1785 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 MSL1Q68DK7 614 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 COPS6Q7L5N1 327 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 SGIP1Q9BQI5 828 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 ZNF652Q9Y2D9 606 aa24.37■■□□□ 1.49
CTDSP1-207ENST00000473420 POLD1P28340 1107 aa24.36■■□□□ 1.49
CTDSP1-207ENST00000473420 FKBP8Q14318 412 aa24.36■■□□□ 1.49
CTDSP1-207ENST00000473420 SLC4A2P04920 1241 aa24.35■■□□□ 1.49
CTDSP1-207ENST00000473420 PTGER2P43116 358 aa24.35■■□□□ 1.49
CTDSP1-207ENST00000473420 PHAXQ9H814 394 aaKnown RBP24.35■■□□□ 1.49
CTDSP1-207ENST00000473420 AIMP1Q12904 312 aaKnown RBP24.34■■□□□ 1.49
CTDSP1-207ENST00000473420 ALDH1L2Q3SY69 923 aa24.34■■□□□ 1.49
CTDSP1-207ENST00000473420 NRXN2Q9P2S2 1712 aa24.33■■□□□ 1.49
CTDSP1-207ENST00000473420 TCERG1O14776 1098 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-207ENST00000473420 GIGYF2Q6Y7W6 1299 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-207ENST00000473420 ATP10DQ9P241 1426 aa24.33■■□□□ 1.49
CTDSP1-207ENST00000473420 TM4SF1P30408 202 aa24.32■■□□□ 1.48
CTDSP1-207ENST00000473420 PLBD2Q8NHP8 589 aa24.32■■□□□ 1.48
CTDSP1-207ENST00000473420 YTHDC1Q96MU7 727 aaKnown RBP24.32■■□□□ 1.48
CTDSP1-207ENST00000473420 ZBTB3Q9H5J0 574 aa24.32■■□□□ 1.48
CTDSP1-207ENST00000473420 AFDNP55196 1824 aaKnown RBP24.32■■□□□ 1.48
CTDSP1-207ENST00000473420 DDX58O95786 925 aaKnown RBP24.31■■□□□ 1.48
CTDSP1-207ENST00000473420 HLFQ16534 295 aa24.31■■□□□ 1.48
CTDSP1-207ENST00000473420 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
CTDSP1-207ENST00000473420 MMP10P09238 476 aa24.3■■□□□ 1.48
CTDSP1-207ENST00000473420 NFIXQ14938 502 aa24.3■■□□□ 1.48
CTDSP1-207ENST00000473420 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
CTDSP1-207ENST00000473420 FLIIQ13045 1269 aa24.29■■□□□ 1.48
CTDSP1-207ENST00000473420 HSP90AB3PQ58FF7 597 aa24.29■■□□□ 1.48
CTDSP1-207ENST00000473420 PARP3Q9Y6F1 533 aa24.29■■□□□ 1.48
CTDSP1-207ENST00000473420 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
CTDSP1-207ENST00000473420 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
CTDSP1-207ENST00000473420 POLRMTO00411 1230 aaKnown RBP24.28■■□□□ 1.48
CTDSP1-207ENST00000473420 G2E3Q7L622 706 aa24.28■■□□□ 1.48
CTDSP1-207ENST00000473420 MRPL50Q8N5N7 158 aaKnown RBP24.28■■□□□ 1.48
CTDSP1-207ENST00000473420 SSH1Q8WYL5 1049 aa24.28■■□□□ 1.48
CTDSP1-207ENST00000473420 DDR1Q08345 913 aa24.27■■□□□ 1.48
CTDSP1-207ENST00000473420 SETDB2Q96T68 719 aa24.27■■□□□ 1.48
CTDSP1-207ENST00000473420 RARSP54136 660 aaKnown RBP24.26■■□□□ 1.47
CTDSP1-207ENST00000473420 BRPF1P55201 1214 aaPredicted RBP24.26■■□□□ 1.47
CTDSP1-207ENST00000473420 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
CTDSP1-207ENST00000473420 RIC3Q7Z5B4 369 aa24.26■■□□□ 1.47
CTDSP1-207ENST00000473420 NIP7Q9Y221 180 aaKnown RBP eCLIP24.26■■□□□ 1.47
CTDSP1-207ENST00000473420 BICDL1Q6ZP65 573 aa24.25■■□□□ 1.47
CTDSP1-207ENST00000473420 ZNF34Q8IZ26 560 aa24.25■■□□□ 1.47
CTDSP1-207ENST00000473420 SMC4Q9NTJ3 1288 aa24.25■■□□□ 1.47
CTDSP1-207ENST00000473420 ADCY9O60503 1353 aa24.25■■□□□ 1.47
CTDSP1-207ENST00000473420 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
CTDSP1-207ENST00000473420 TCIRG1Q13488 830 aa24.24■■□□□ 1.47
CTDSP1-207ENST00000473420 IBTKQ9P2D0 1353 aaPredicted RBP24.24■■□□□ 1.47
CTDSP1-207ENST00000473420 PI4KAP2A4QPH2 592 aa24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 SERPINB2P05120 415 aa24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 PARP10Q53GL7 1025 aa24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 PI4KAP1Q8N8J0 262 aa24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 PPP1R1BQ9UD71 204 aaPredicted RBP24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 PTPRCP08575 1304 aa24.23■■□□□ 1.47
CTDSP1-207ENST00000473420 C10orf71Q711Q0 1435 aa24.22■■□□□ 1.47
CTDSP1-207ENST00000473420 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
CTDSP1-207ENST00000473420 UBN2Q6ZU65 1347 aa24.21■■□□□ 1.47
CTDSP1-207ENST00000473420 METTL22Q9BUU2 404 aaPredicted RBP24.21■■□□□ 1.47
CTDSP1-207ENST00000473420 BCL2L13Q9BXK5 485 aa24.21■■□□□ 1.47
CTDSP1-207ENST00000473420 KIF16BQ96L93 1317 aa24.2■■□□□ 1.46
CTDSP1-207ENST00000473420 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
CTDSP1-207ENST00000473420 ISCA1Q9BUE6 129 aa24.2■■□□□ 1.46
CTDSP1-207ENST00000473420 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
CTDSP1-207ENST00000473420 GPTP24298 496 aa24.19■■□□□ 1.46
CTDSP1-207ENST00000473420 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
CTDSP1-207ENST00000473420 NYXQ9GZU5 481 aa24.19■■□□□ 1.46
CTDSP1-207ENST00000473420 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 ANKRD31Q8N7Z5 1873 aa24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 NEXNQ0ZGT2 675 aa24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 PPP1R42Q7Z4L9 355 aa24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 NBPF5PQ86XG9 351 aaPredicted RBP24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 MYD88Q99836 296 aa24.18■■□□□ 1.46
CTDSP1-207ENST00000473420 TPTE2Q6XPS3 522 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 NLRP10Q86W26 655 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 CNBD1Q8NA66 436 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 CD2APQ9Y5K6 639 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 KIAA1551Q9HCM1 1747 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 PXDNLA1KZ92 1463 aa24.17■■□□□ 1.46
CTDSP1-207ENST00000473420 SUSD4Q5VX71 490 aa24.16■■□□□ 1.46
CTDSP1-207ENST00000473420 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
CTDSP1-207ENST00000473420 NTSR2O95665 410 aa24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 CCDC191Q8NCU4 936 aa24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 ARHGAP45Q92619 1136 aa24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 FHDC1Q9C0D6 1143 aaPredicted RBP24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 LAMB2P55268 1798 aa24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 RIC1Q4ADV7 1423 aa24.15■■□□□ 1.46
CTDSP1-207ENST00000473420 ATP5J2-PTCD1G3V325 749 aa24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 BCAR3O75815 825 aa24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 ST5P78524 1137 aa24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 UTP14AQ9BVJ6 771 aaKnown RBP24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 NOB1Q9ULX3 412 aaKnown RBP24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 DLEC1Q9Y238 1755 aa24.14■■□□□ 1.45
CTDSP1-207ENST00000473420 F6X3S4 739 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms