RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
PCOLCE-205ENST00000472348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 BCAR3O75815 825 aa20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
PCOLCE-205ENST00000472348 ATF7IPQ6VMQ6 1270 aa20.44■□□□□ 0.86
PCOLCE-205ENST00000472348 GIGYF2Q6Y7W6 1299 aaKnown RBP20.44■□□□□ 0.86
PCOLCE-205ENST00000472348 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
PCOLCE-205ENST00000472348 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
PCOLCE-205ENST00000472348 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
PCOLCE-205ENST00000472348 ANXA1P04083 346 aa20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 RFC4P35249 363 aa20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 TRIM28Q13263 835 aaKnown RBP20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 G2E3Q7L622 706 aa20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 PNPLA7Q6ZV29 1317 aa20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 CASZ1Q86V15 1759 aa20.43■□□□□ 0.86
PCOLCE-205ENST00000472348 LRP5O75197 1615 aa20.42■□□□□ 0.86
PCOLCE-205ENST00000472348 CAMTA2O94983 1202 aa20.42■□□□□ 0.86
PCOLCE-205ENST00000472348 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
PCOLCE-205ENST00000472348 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
PCOLCE-205ENST00000472348 ADCY9O60503 1353 aa20.42■□□□□ 0.86
PCOLCE-205ENST00000472348 ZPR1O75312 459 aa20.41■□□□□ 0.86
PCOLCE-205ENST00000472348 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
PCOLCE-205ENST00000472348 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
PCOLCE-205ENST00000472348 DNAAF4Q8WXU2 420 aa20.41■□□□□ 0.86
PCOLCE-205ENST00000472348 PDGFDQ9GZP0 370 aaPredicted RBP20.41■□□□□ 0.86
PCOLCE-205ENST00000472348 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 TCERG1O14776 1098 aaKnown RBP20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 ABCC4O15439 1325 aa20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 AMIGO3Q86WK7 504 aa20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 METTL22Q9BUU2 404 aaPredicted RBP20.4■□□□□ 0.86
PCOLCE-205ENST00000472348 TCIRG1Q13488 830 aa20.39■□□□□ 0.85
PCOLCE-205ENST00000472348 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
PCOLCE-205ENST00000472348 NLGN1Q8N2Q7 840 aa20.39■□□□□ 0.85
PCOLCE-205ENST00000472348 TRIM27P14373 513 aa20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 RRP1P56182 461 aaKnown RBP20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 AIMP1Q12904 312 aaKnown RBP20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 LINS1Q8NG48 757 aa20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
PCOLCE-205ENST00000472348 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 ALDH1L1O75891 902 aa20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
PCOLCE-205ENST00000472348 GYS1P13807 737 aa20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 FRAT1Q92837 279 aaPredicted RBP20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 BCL2L12Q9HB09 334 aa20.36■□□□□ 0.85
PCOLCE-205ENST00000472348 PHF14O94880 888 aa20.35■□□□□ 0.85
PCOLCE-205ENST00000472348 USPL1Q5W0Q7 1092 aa20.35■□□□□ 0.85
PCOLCE-205ENST00000472348 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
PCOLCE-205ENST00000472348 ZBTB3Q9H5J0 574 aa20.35■□□□□ 0.85
PCOLCE-205ENST00000472348 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
PCOLCE-205ENST00000472348 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
PCOLCE-205ENST00000472348 CHMP4BQ9H444 224 aaKnown RBP20.34■□□□□ 0.85
PCOLCE-205ENST00000472348 ZBTB7AO95365 584 aa20.33■□□□□ 0.85
PCOLCE-205ENST00000472348 TM4SF1P30408 202 aa20.33■□□□□ 0.85
PCOLCE-205ENST00000472348 HLFQ16534 295 aa20.33■□□□□ 0.85
PCOLCE-205ENST00000472348 AAMPQ13685 434 aa20.32■□□□□ 0.84
PCOLCE-205ENST00000472348 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
PCOLCE-205ENST00000472348 SRCIN1Q9C0H9 1055 aa20.32■□□□□ 0.84
PCOLCE-205ENST00000472348 ARXQ96QS3 562 aa20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 SPON1Q9HCB6 807 aa20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 SRP68Q9UHB9 627 aaKnown RBP20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 HDAC5Q9UQL6 1122 aa20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
PCOLCE-205ENST00000472348 UTYO14607 1347 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 F6X3S4 739 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 IGKV5-2P06315 115 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
PCOLCE-205ENST00000472348 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 LAMB2P55268 1798 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 FKBP8Q14318 412 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 MYD88Q99836 296 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 ATF5Q9Y2D1 282 aaPredicted RBP20.29■□□□□ 0.84
PCOLCE-205ENST00000472348 GCKRQ14397 625 aa20.28■□□□□ 0.84
PCOLCE-205ENST00000472348 DDX19BQ9UMR2 479 aa20.28■□□□□ 0.84
PCOLCE-205ENST00000472348 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms