RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 RGL2O15211 777 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 ST5P78524 1137 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 RASSF7Q02833 373 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 HLFQ16534 295 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 NBPF5PQ86XG9 351 aaPredicted RBP11.86□□□□□ -0.51
USF1-204ENST00000472217 RUNDC1Q96C34 613 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 CACNA1SQ13698 1873 aa11.86□□□□□ -0.51
USF1-204ENST00000472217 MYL6BP14649 208 aa11.85□□□□□ -0.51
USF1-204ENST00000472217 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
USF1-204ENST00000472217 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
USF1-204ENST00000472217 PDZRN3Q9UPQ7 1066 aa11.85□□□□□ -0.51
USF1-204ENST00000472217 NIP7Q9Y221 180 aaKnown RBP eCLIP11.85□□□□□ -0.51
USF1-204ENST00000472217 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
USF1-204ENST00000472217 NUP98P52948 1817 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 NFKBIEO00221 500 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 KIF3CO14782 793 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 PRELPP51888 382 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
USF1-204ENST00000472217 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
USF1-204ENST00000472217 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 ERVV-1B6SEH8 477 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 SRGNP10124 158 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
USF1-204ENST00000472217 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
USF1-204ENST00000472217 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
USF1-204ENST00000472217 CHL1O00533 1208 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 C21orf2O43822 256 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 EIF2S2P20042 333 aaKnown RBP11.82□□□□□ -0.52
USF1-204ENST00000472217 LMNB1P20700 586 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 PDIA6Q15084 440 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 STYK1Q6J9G0 422 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
USF1-204ENST00000472217 TPTE2Q6XPS3 522 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 KIF6Q6ZMV9 814 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
USF1-204ENST00000472217 CCDC88AQ3V6T2 1871 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
USF1-204ENST00000472217 KRT24Q2M2I5 525 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 LRP10Q7Z4F1 713 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 LAS1LQ9Y4W2 734 aaKnown RBP11.81□□□□□ -0.52
USF1-204ENST00000472217 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
USF1-204ENST00000472217 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 ANXA1P04083 346 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 NPR1P16066 1061 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 GPTP24298 496 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
USF1-204ENST00000472217 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 KDM2BQ8NHM5 1336 aa11.8□□□□□ -0.52
USF1-204ENST00000472217 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
USF1-204ENST00000472217 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
USF1-204ENST00000472217 RIC1Q4ADV7 1423 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 APAF1O14727 1248 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
USF1-204ENST00000472217 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
USF1-204ENST00000472217 TOMM70O94826 608 aa11.78□□□□□ -0.52
USF1-204ENST00000472217 HSPA6P17066 643 aa11.78□□□□□ -0.52
USF1-204ENST00000472217 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
USF1-204ENST00000472217 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
USF1-204ENST00000472217 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
USF1-204ENST00000472217 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
USF1-204ENST00000472217 NTSR2O95665 410 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 CRY2Q49AN0 593 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 CFAP44Q96MT7 982 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
USF1-204ENST00000472217 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 HOXB7P09629 217 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 AIMP1Q12904 312 aaKnown RBP11.76□□□□□ -0.53
USF1-204ENST00000472217 PARP10Q53GL7 1025 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 CCDC93Q567U6 631 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
USF1-204ENST00000472217 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
USF1-204ENST00000472217 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
USF1-204ENST00000472217 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
USF1-204ENST00000472217 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
USF1-204ENST00000472217 OLFM4Q6UX06 510 aa11.75□□□□□ -0.53
USF1-204ENST00000472217 PPP1R42Q7Z4L9 355 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms