RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 TAF1DQ9H5J8 278 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-205ENST00000470585 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
SF3A3-205ENST00000470585 MKRN1Q9UHC7 482 aaKnown RBP9.27□□□□□ -0.93
SF3A3-205ENST00000470585 PDE4DIPQ5VU43 2346 aa9.27□□□□□ -0.93
SF3A3-205ENST00000470585 C21orf2O43822 256 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 ITGBL1O95965 494 aaPredicted RBP9.26□□□□□ -0.93
SF3A3-205ENST00000470585 SRGNP10124 158 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 RGS19P49795 217 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 ST5P78524 1137 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 GRIPAP1Q4V328 841 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 PRR5LQ6MZQ0 368 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 AEBP1Q8IUX7 1158 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 ADAMTSL1Q8N6G6 1762 aa9.26□□□□□ -0.93
SF3A3-205ENST00000470585 COL11A2P13942 1736 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-205ENST00000470585 THSD7BQ9C0I4 1608 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 KLRG2A4D1S0 409 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-205ENST00000470585 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
SF3A3-205ENST00000470585 VEGFBP49765 207 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 CCDC93Q567U6 631 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 NPM2Q86SE8 214 aaKnown RBP9.25□□□□□ -0.93
SF3A3-205ENST00000470585 MORC1Q86VD1 984 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 RTKN2Q8IZC4 609 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 TTC5Q8N0Z6 440 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 CNBD1Q8NA66 436 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.935e-13■□□□□ 10.8
SF3A3-205ENST00000470585 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 HACL1Q9UJ83 578 aa9.25□□□□□ -0.93
SF3A3-205ENST00000470585 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 CA12O43570 354 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 DDNO94850 711 aaPredicted RBP9.24□□□□□ -0.93
SF3A3-205ENST00000470585 FKBP4Q02790 459 aaKnown RBP eCLIP9.24□□□□□ -0.93
SF3A3-205ENST00000470585 EVX2Q03828 476 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 TBC1D9BQ66K14 1250 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 PRPF40BQ6NWY9 871 aaKnown RBP9.24□□□□□ -0.93
SF3A3-205ENST00000470585 ABHD8Q96I13 439 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
SF3A3-205ENST00000470585 HSPA8P11142 646 aaKnown RBP9.23□□□□□ -0.93
SF3A3-205ENST00000470585 NPR1P16066 1061 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 ECE1P42892 770 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 DEFB115Q30KQ5 88 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 CC2D2BQ6DHV5 1058 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 GPC2Q8N158 579 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 PANK3Q9H999 370 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 LGR6Q9HBX8 967 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 ZNF652Q9Y2D9 606 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 KNSTRNQ9Y448 316 aa9.23□□□□□ -0.93
SF3A3-205ENST00000470585 BCORQ6W2J9 1755 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 FZD9O00144 591 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 CANXP27824 592 aaKnown RBP9.22□□□□□ -0.93
SF3A3-205ENST00000470585 EPHX2P34913 555 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 LBX1P52954 281 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 PSMD1Q99460 953 aa9.22□□□□□ -0.93
SF3A3-205ENST00000470585 NPHP1O15259 732 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 POTEJP0CG39 1038 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 ALDH1B1P30837 517 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 MAP2K2P36507 400 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
SF3A3-205ENST00000470585 MLLT1Q03111 559 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-205ENST00000470585 GAS2L2Q8NHY3 880 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 HHIPL1Q96JK4 782 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 WDR33Q9C0J8 1336 aaKnown RBP9.21□□□□□ -0.94
SF3A3-205ENST00000470585 SIPA1L3O60292 1781 aaPredicted RBP9.21□□□□□ -0.94
SF3A3-205ENST00000470585 CEMIPQ8WUJ3 1361 aa9.21□□□□□ -0.94
SF3A3-205ENST00000470585 TEFQ10587 303 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 MTHFSDQ2M296 383 aaKnown RBP9.2□□□□□ -0.94
SF3A3-205ENST00000470585 TPTE2Q6XPS3 522 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 CNTROBQ8N137 903 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
SF3A3-205ENST00000470585 VPS33BQ9H267 617 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 RIC1Q4ADV7 1423 aa9.2□□□□□ -0.94
SF3A3-205ENST00000470585 GNAT3A8MTJ3 354 aa9.19□□□□□ -0.94
SF3A3-205ENST00000470585 FAM161AQ3B820 660 aa9.19□□□□□ -0.94
SF3A3-205ENST00000470585 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-205ENST00000470585 NBPF5PQ86XG9 351 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-205ENST00000470585 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
SF3A3-205ENST00000470585 JDP2Q8WYK2 163 aa9.19□□□□□ -0.94
SF3A3-205ENST00000470585 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
SF3A3-205ENST00000470585 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
SF3A3-205ENST00000470585 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
SF3A3-205ENST00000470585 DIAPH1O60610 1272 aaKnown RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 LMOD1P29536 600 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 IARSP41252 1262 aaKnown RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 CRY2Q49AN0 593 aa9.18□□□□□ -0.94
SF3A3-205ENST00000470585 EAPPQ56P03 285 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 USP50Q70EL3 339 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 SNED1Q8TER0 1413 aa9.18□□□□□ -0.94
SF3A3-205ENST00000470585 CDHR2Q9BYE9 1310 aa9.18□□□□□ -0.94
SF3A3-205ENST00000470585 IBTKQ9P2D0 1353 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-205ENST00000470585 TBC1D2BQ9UPU7 963 aa9.18□□□□□ -0.94
SF3A3-205ENST00000470585 CACNA1SQ13698 1873 aa9.17□□□□□ -0.94
SF3A3-205ENST00000470585 KIF7Q2M1P5 1343 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms