RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CHGBP05060 677 aa21.58■■□□□ 1.04
MCF2L-221ENST00000469415 COL9A3Q14050 684 aaPredicted RBP21.58■■□□□ 1.04
MCF2L-221ENST00000469415 MPNDQ8N594 471 aa21.58■■□□□ 1.04
MCF2L-221ENST00000469415 SNX14Q9Y5W7 946 aa21.58■■□□□ 1.04
MCF2L-221ENST00000469415 ERBB3P21860 1342 aa21.57■■□□□ 1.04
MCF2L-221ENST00000469415 PRIM1P49642 420 aaKnown RBP21.57■■□□□ 1.04
MCF2L-221ENST00000469415 EPHA10Q5JZY3 1008 aa21.57■■□□□ 1.04
MCF2L-221ENST00000469415 EAF2Q96CJ1 260 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-221ENST00000469415 PKNOX2Q96KN3 472 aa21.57■■□□□ 1.04
MCF2L-221ENST00000469415 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-221ENST00000469415 TATP17735 454 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-221ENST00000469415 ADCK5Q3MIX3 580 aa21.57■■□□□ 1.04
MCF2L-221ENST00000469415 KAZALD1Q96I82 304 aa21.57■■□□□ 1.04
MCF2L-221ENST00000469415 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 IGKV5-2P06315 115 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 AK2P54819 239 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 TTC5Q8N0Z6 440 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 JAKMIP1Q96N16 626 aaKnown RBP21.56■■□□□ 1.04
MCF2L-221ENST00000469415 C19orf44Q9H6X5 657 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
MCF2L-221ENST00000469415 NAP1L5Q96NT1 182 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-221ENST00000469415 SASH1O94885 1247 aa21.55■■□□□ 1.04
MCF2L-221ENST00000469415 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
MCF2L-221ENST00000469415 HSPA4P34932 840 aa21.55■■□□□ 1.04
MCF2L-221ENST00000469415 TMEM63CQ9P1W3 806 aa21.55■■□□□ 1.04
MCF2L-221ENST00000469415 GLRX3O76003 335 aaKnown RBP21.55■■□□□ 1.04
MCF2L-221ENST00000469415 UBE3BQ7Z3V4 1068 aa21.55■■□□□ 1.04
MCF2L-221ENST00000469415 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
MCF2L-221ENST00000469415 LTN1O94822 1766 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 GADD45BO75293 160 aaPredicted RBP21.54■■□□□ 1.04
MCF2L-221ENST00000469415 LARGE1O95461 756 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 NEXNQ0ZGT2 675 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 HSP90AB4PQ58FF6 505 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 CCDC83Q8IWF9 413 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 NECAB1Q8N987 351 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 LINS1Q8NG48 757 aa21.54■■□□□ 1.04
MCF2L-221ENST00000469415 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
MCF2L-221ENST00000469415 HOXB7P09629 217 aa21.53■■□□□ 1.04
MCF2L-221ENST00000469415 PDIA6Q15084 440 aa21.53■■□□□ 1.04
MCF2L-221ENST00000469415 LSG1Q9H089 658 aaKnown RBP21.53■■□□□ 1.04
MCF2L-221ENST00000469415 RBSNQ9H1K0 784 aa21.53■■□□□ 1.04
MCF2L-221ENST00000469415 ANP32BQ92688 251 aaKnown RBP21.53■■□□□ 1.04
MCF2L-221ENST00000469415 FSD1Q9BTV5 496 aa21.53■■□□□ 1.04
MCF2L-221ENST00000469415 SLC52A2Q9HAB3 445 aa21.52■■□□□ 1.04
MCF2L-221ENST00000469415 NFAT5O94916 1531 aa21.52■■□□□ 1.04
MCF2L-221ENST00000469415 NPHP3Q7Z494 1330 aa21.52■■□□□ 1.03
MCF2L-221ENST00000469415 RAD50Q92878 1312 aa21.51■■□□□ 1.03
MCF2L-221ENST00000469415 PHKG2P15735 406 aa21.51■■□□□ 1.03
MCF2L-221ENST00000469415 CCDC85AQ96PX6 553 aaPredicted RBP21.51■■□□□ 1.03
MCF2L-221ENST00000469415 CYP27B1O15528 508 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 DNAJC2Q99543 621 aaKnown RBP21.5■■□□□ 1.03
MCF2L-221ENST00000469415 PTMSP20962 102 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 CABP4P57796 275 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 NMIQ13287 307 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-221ENST00000469415 RUFY3Q7L099 469 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 GPATCH3Q96I76 525 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
MCF2L-221ENST00000469415 ESPNB1AK53 854 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 ALDH1L1O75891 902 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 ANKRD13DQ6ZTN6 518 aa21.5■■□□□ 1.03
MCF2L-221ENST00000469415 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
MCF2L-221ENST00000469415 FIBPO43427 364 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 STK3Q13188 491 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 PPFIA3O75145 1194 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 BRD1O95696 1058 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 MCM2P49736 904 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 ANAPC15P60006 121 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 SLFNL1Q499Z3 407 aa21.49■■□□□ 1.03
MCF2L-221ENST00000469415 TMEM94Q12767 1356 aa21.48■■□□□ 1.03
MCF2L-221ENST00000469415 VPS37CA5D8V6 355 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-221ENST00000469415 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
MCF2L-221ENST00000469415 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
MCF2L-221ENST00000469415 A0A087WZG4 1122 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 LARP1Q6PKG0 1096 aaKnown RBP21.47■■□□□ 1.03
MCF2L-221ENST00000469415 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 IFNL2Q8IZJ0 200 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 A0A0D9SFI3 127 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 CUL4AQ13619 759 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 GCKRQ14397 625 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 CLEC17AQ6ZS10 378 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 PDRG1Q9NUG6 133 aa21.47■■□□□ 1.03
MCF2L-221ENST00000469415 USP48Q86UV5 1035 aa21.46■■□□□ 1.03
MCF2L-221ENST00000469415 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
MCF2L-221ENST00000469415 ZBTB3Q9H5J0 574 aa21.46■■□□□ 1.03
MCF2L-221ENST00000469415 RBM8AQ9Y5S9 174 aaKnown RBP21.46■■□□□ 1.03
MCF2L-221ENST00000469415 TOM1L2Q6ZVM7 507 aa21.46■■□□□ 1.03
MCF2L-221ENST00000469415 TFCP2Q12800 502 aa21.45■■□□□ 1.02
MCF2L-221ENST00000469415 FAM173BQ6P4H8 233 aa21.45■■□□□ 1.02
MCF2L-221ENST00000469415 CCDC129Q6ZRS4 1044 aa21.45■■□□□ 1.02
MCF2L-221ENST00000469415 RUFY2Q8WXA3 655 aa21.45■■□□□ 1.02
MCF2L-221ENST00000469415 SEC62Q99442 399 aaKnown RBP21.45■■□□□ 1.02
MCF2L-221ENST00000469415 TAOK2Q9UL54 1235 aa21.45■■□□□ 1.02
MCF2L-221ENST00000469415 C1orf167Q5SNV9 1468 aa21.44■■□□□ 1.02
MCF2L-221ENST00000469415 AOX1Q06278 1338 aa21.44■■□□□ 1.02
MCF2L-221ENST00000469415 LRRC37A3O60309 1634 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms