RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
USP11-206ENST00000469080 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
USP11-206ENST00000469080 RTL1A6NKG5 1358 aa14.81□□□□□ -0.04
USP11-206ENST00000469080 PIK3R4Q99570 1358 aa14.81□□□□□ -0.04
USP11-206ENST00000469080 REC8O95072 547 aa14.81□□□□□ -0.04
USP11-206ENST00000469080 SIRT1Q96EB6 747 aa14.81□□□□□ -0.04
USP11-206ENST00000469080 MCCP23508 829 aa14.81□□□□□ -0.04
USP11-206ENST00000469080 TNNT3P45378 269 aaPredicted RBP14.81□□□□□ -0.04
USP11-206ENST00000469080 EIF4A1P60842 406 aaKnown RBP14.81□□□□□ -0.04
USP11-206ENST00000469080 K7ELQ4 463 aaPredicted RBP14.8□□□□□ -0.04
USP11-206ENST00000469080 ERC2O15083 957 aa14.8□□□□□ -0.04
USP11-206ENST00000469080 GPTP24298 496 aa14.8□□□□□ -0.04
USP11-206ENST00000469080 ZNF496Q96IT1 587 aaPredicted RBP14.8□□□□□ -0.04
USP11-206ENST00000469080 PKP1Q13835 747 aa14.8□□□□□ -0.04
USP11-206ENST00000469080 GORABQ5T7V8 394 aa14.8□□□□□ -0.04
USP11-206ENST00000469080 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
USP11-206ENST00000469080 TNPO1Q92973 898 aaKnown RBP14.79□□□□□ -0.04
USP11-206ENST00000469080 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
USP11-206ENST00000469080 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
USP11-206ENST00000469080 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
USP11-206ENST00000469080 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
USP11-206ENST00000469080 STK3Q13188 491 aa14.79□□□□□ -0.04
USP11-206ENST00000469080 FAM193AP78312 1265 aa14.79□□□□□ -0.04
USP11-206ENST00000469080 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
USP11-206ENST00000469080 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
USP11-206ENST00000469080 GBP4Q96PP9 640 aa14.78□□□□□ -0.04
USP11-206ENST00000469080 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
USP11-206ENST00000469080 A1BGP04217 495 aa14.78□□□□□ -0.04
USP11-206ENST00000469080 PPP1R9BQ96SB3 815 aa14.78□□□□□ -0.04
USP11-206ENST00000469080 SOS1Q07889 1333 aaPredicted RBP14.78□□□□□ -0.04
USP11-206ENST00000469080 PRPF40AO75400 957 aaKnown RBP14.78□□□□□ -0.04
USP11-206ENST00000469080 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
USP11-206ENST00000469080 CLGNO14967 610 aa14.77□□□□□ -0.04
USP11-206ENST00000469080 PTMAP06454 111 aaKnown RBP14.77□□□□□ -0.04
USP11-206ENST00000469080 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.04
USP11-206ENST00000469080 A0A087WZG4 1122 aa14.77□□□□□ -0.05
USP11-206ENST00000469080 ATP8B2P98198 1209 aa14.77□□□□□ -0.05
USP11-206ENST00000469080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
USP11-206ENST00000469080 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
USP11-206ENST00000469080 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
USP11-206ENST00000469080 PALD1Q9ULE6 856 aa14.76□□□□□ -0.05
USP11-206ENST00000469080 CEP170BQ9Y4F5 1589 aaPredicted RBP14.76□□□□□ -0.05
USP11-206ENST00000469080 CAVIN1Q6NZI2 390 aaKnown RBP14.76□□□□□ -0.05
USP11-206ENST00000469080 PDCL2Q8N4E4 241 aa14.76□□□□□ -0.05
USP11-206ENST00000469080 NOL7Q9UMY1 257 aaKnown RBP14.76□□□□□ -0.05
USP11-206ENST00000469080 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
USP11-206ENST00000469080 ACSBG1Q96GR2 724 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
USP11-206ENST00000469080 CCDC66A2RUB6 948 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 ZNF500O60304 480 aaPredicted RBP14.75□□□□□ -0.05
USP11-206ENST00000469080 HOMEZQ8IX15 550 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 TIGD1Q96MW7 591 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
USP11-206ENST00000469080 ERICH4A6NGS2 130 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.055e-8■■■□□ 19.2
USP11-206ENST00000469080 AMOTQ4VCS5 1084 aa14.75□□□□□ -0.05
USP11-206ENST00000469080 HSP90AB3PQ58FF7 597 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 ZNF790Q6PG37 636 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
USP11-206ENST00000469080 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
USP11-206ENST00000469080 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 DLC1Q96QB1 1528 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 NPHP1O15259 732 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 GIGYF1O75420 1035 aaPredicted RBP14.74□□□□□ -0.05
USP11-206ENST00000469080 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
USP11-206ENST00000469080 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
USP11-206ENST00000469080 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
USP11-206ENST00000469080 SUCLG2Q96I99 432 aa14.73□□□□□ -0.05
USP11-206ENST00000469080 NRXN3Q9Y4C0 1643 aa14.73□□□□□ -0.05
USP11-206ENST00000469080 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
USP11-206ENST00000469080 ZNF594Q96JF6 807 aaPredicted RBP14.73□□□□□ -0.05
USP11-206ENST00000469080 USP26Q9BXU7 913 aa14.73□□□□□ -0.05
USP11-206ENST00000469080 CHGBP05060 677 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 ANKRD13DQ6ZTN6 518 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 KIF1BPQ96EK5 621 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 LRRC2Q9BYS8 371 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 KIAA0232Q92628 1395 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 CDC42BPGQ6DT37 1551 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 FERMT3Q86UX7 667 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
USP11-206ENST00000469080 ZKSCAN5Q9Y2L8 839 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 PTMSP20962 102 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 KCNQ4P56696 695 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 SLFNL1Q499Z3 407 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 CNTROBQ8N137 903 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 GPATCH3Q96I76 525 aa14.72□□□□□ -0.05
USP11-206ENST00000469080 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
USP11-206ENST00000469080 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
USP11-206ENST00000469080 DDX46Q7L014 1031 aaKnown RBP14.71□□□□□ -0.05
USP11-206ENST00000469080 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
USP11-206ENST00000469080 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
USP11-206ENST00000469080 RABEP1Q15276 862 aa14.71□□□□□ -0.05
USP11-206ENST00000469080 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
USP11-206ENST00000469080 CASTP20810 708 aaKnown RBP14.71□□□□□ -0.06
USP11-206ENST00000469080 JAKMIP1Q96N16 626 aaKnown RBP14.71□□□□□ -0.06
USP11-206ENST00000469080 LOC102724159A0A0B4J2E5 919 aa14.7□□□□□ -0.06
USP11-206ENST00000469080 GRM8O00222 908 aa14.7□□□□□ -0.06
USP11-206ENST00000469080 PWP2Q15269 919 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms