RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 C10orf71Q711Q0 1435 aa19.13■□□□□ 0.65
TMEM39A-205ENST00000468676 BICDL1Q6ZP65 573 aa19.12■□□□□ 0.65
TMEM39A-205ENST00000468676 LRP10Q7Z4F1 713 aa19.12■□□□□ 0.65
TMEM39A-205ENST00000468676 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
TMEM39A-205ENST00000468676 TSR2Q969E8 191 aaKnown RBP19.12■□□□□ 0.65
TMEM39A-205ENST00000468676 MYH16Q9H6N6 1097 aa19.12■□□□□ 0.65
TMEM39A-205ENST00000468676 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
TMEM39A-205ENST00000468676 HYPKQ9NX55 129 aa19.11■□□□□ 0.65
TMEM39A-205ENST00000468676 CHPF2Q9P2E5 772 aa19.11■□□□□ 0.65
TMEM39A-205ENST00000468676 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
TMEM39A-205ENST00000468676 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
TMEM39A-205ENST00000468676 PROSER3Q2NL68 480 aa19.1■□□□□ 0.65
TMEM39A-205ENST00000468676 CCDC30Q5VVM6 783 aa19.1■□□□□ 0.65
TMEM39A-205ENST00000468676 TTLL7Q6ZT98 887 aa19.1■□□□□ 0.65
TMEM39A-205ENST00000468676 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
TMEM39A-205ENST00000468676 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
TMEM39A-205ENST00000468676 FANCIQ9NVI1 1328 aa19.09■□□□□ 0.65
TMEM39A-205ENST00000468676 NUP98P52948 1817 aa19.09■□□□□ 0.65
TMEM39A-205ENST00000468676 ANXA1P04083 346 aa19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 HLFQ16534 295 aa19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 GPR162Q16538 588 aa19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 TWISTNBQ3B726 338 aaPredicted RBP19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 GIGYF2Q6Y7W6 1299 aaKnown RBP19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 COPS6Q7L5N1 327 aa19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 NIP7Q9Y221 180 aaKnown RBP eCLIP19.08■□□□□ 0.64
TMEM39A-205ENST00000468676 NPHP1O15259 732 aa19.07■□□□□ 0.64
TMEM39A-205ENST00000468676 XAGE3Q8WTP9 111 aa19.07■□□□□ 0.64
TMEM39A-205ENST00000468676 ZBTB3Q9H5J0 574 aa19.07■□□□□ 0.64
TMEM39A-205ENST00000468676 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
TMEM39A-205ENST00000468676 AIMP1Q12904 312 aaKnown RBP19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 NBPF5PQ86XG9 351 aaPredicted RBP19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 CNBD1Q8NA66 436 aa19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
TMEM39A-205ENST00000468676 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 GRIN3BO60391 1043 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 ST5P78524 1137 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 BRIP1Q9BX63 1249 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 STK31Q9BXU1 1019 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 NYXQ9GZU5 481 aa19.05■□□□□ 0.64
TMEM39A-205ENST00000468676 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 E9PSI1 815 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 PRR5LQ6MZQ0 368 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 PLBD2Q8NHP8 589 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
TMEM39A-205ENST00000468676 DPEP1P16444 411 aa19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 PDE6BP35913 854 aa19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 PARP10Q53GL7 1025 aa19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 ZNF34Q8IZ26 560 aa19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 GOLGB1Q14789 3259 aaKnown RBP19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 KIAA1551Q9HCM1 1747 aa19.03■□□□□ 0.64
TMEM39A-205ENST00000468676 PIM2Q9P1W9 311 aa19.02■□□□□ 0.64
TMEM39A-205ENST00000468676 IBTKQ9P2D0 1353 aaPredicted RBP19.02■□□□□ 0.64
TMEM39A-205ENST00000468676 H0YIN7 160 aa19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 VAMP4O75379 141 aa19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 PPP1R42Q7Z4L9 355 aa19.01■□□□□ 0.63
TMEM39A-205ENST00000468676 KCNA3P22001 575 aa19■□□□□ 0.63
TMEM39A-205ENST00000468676 GPTP24298 496 aa19■□□□□ 0.63
TMEM39A-205ENST00000468676 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.63
TMEM39A-205ENST00000468676 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
TMEM39A-205ENST00000468676 C2CD5Q86YS7 1000 aa18.99■□□□□ 0.63
TMEM39A-205ENST00000468676 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
TMEM39A-205ENST00000468676 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
TMEM39A-205ENST00000468676 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 FAM177BA6PVY3 158 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 CHRNA5P30532 468 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 DALRD3Q5D0E6 543 aaKnown RBP18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 RIC3Q7Z5B4 369 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 PHAXQ9H814 394 aaKnown RBP18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 ANKRD31Q8N7Z5 1873 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 UBN2Q6ZU65 1347 aa18.98■□□□□ 0.63
TMEM39A-205ENST00000468676 SUSD4Q5VX71 490 aa18.97■□□□□ 0.63
TMEM39A-205ENST00000468676 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
TMEM39A-205ENST00000468676 UTP14AQ9BVJ6 771 aaKnown RBP18.97■□□□□ 0.63
TMEM39A-205ENST00000468676 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
TMEM39A-205ENST00000468676 CHD4Q14839 1912 aa18.97■□□□□ 0.63
TMEM39A-205ENST00000468676 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.63
TMEM39A-205ENST00000468676 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
TMEM39A-205ENST00000468676 NLRP10Q86W26 655 aa18.96■□□□□ 0.63
TMEM39A-205ENST00000468676 CCDC24Q8N4L8 307 aa18.96■□□□□ 0.63
TMEM39A-205ENST00000468676 KLRG2A4D1S0 409 aaPredicted RBP18.95■□□□□ 0.62
TMEM39A-205ENST00000468676 NTSR2O95665 410 aa18.95■□□□□ 0.62
TMEM39A-205ENST00000468676 TRMT2AQ8IZ69 625 aaKnown RBP18.95■□□□□ 0.62
TMEM39A-205ENST00000468676 TTLL6Q8N841 843 aa18.95■□□□□ 0.62
TMEM39A-205ENST00000468676 UTRNP46939 3433 aa18.95■□□□□ 0.62
TMEM39A-205ENST00000468676 ARFGEF2Q9Y6D5 1785 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 RIC1Q4ADV7 1423 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 TCERG1O14776 1098 aaKnown RBP18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 SRGNP10124 158 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms