RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 DDB1Q16531 1140 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 WASF1Q92558 559 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
BRAT1-203ENST00000467558 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-203ENST00000467558 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-203ENST00000467558 ZNF213O14771 459 aa16.25■□□□□ 0.19
BRAT1-203ENST00000467558 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
BRAT1-203ENST00000467558 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 TET3O43151 1660 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-203ENST00000467558 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 ARHGAP31Q2M1Z3 1444 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 IL15P40933 162 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-203ENST00000467558 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-203ENST00000467558 HMG20BQ9P0W2 317 aa16.24■□□□□ 0.19
BRAT1-203ENST00000467558 SYNMO15061 1565 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 G2E3Q7L622 706 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 FERMT3Q86UX7 667 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
BRAT1-203ENST00000467558 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-203ENST00000467558 ABCC3O15438 1527 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
BRAT1-203ENST00000467558 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-203ENST00000467558 ZNF592Q92610 1267 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 KIF1BO60333 1816 aa16.23■□□□□ 0.19
BRAT1-203ENST00000467558 HMGN5P82970 282 aaKnown RBP16.23■□□□□ 0.19
BRAT1-203ENST00000467558 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 CEP89Q96ST8 783 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
BRAT1-203ENST00000467558 ANAPC15P60006 121 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 ATP2B2Q01814 1243 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 PIP4K2AP48426 406 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-203ENST00000467558 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
BRAT1-203ENST00000467558 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
BRAT1-203ENST00000467558 TNPO1Q92973 898 aaKnown RBP16.21■□□□□ 0.19
BRAT1-203ENST00000467558 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
BRAT1-203ENST00000467558 UQCRFS1P1P0C7P4 283 aa16.21■□□□□ 0.19
BRAT1-203ENST00000467558 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
BRAT1-203ENST00000467558 NOC3LQ8WTT2 800 aaKnown RBP16.21■□□□□ 0.19
BRAT1-203ENST00000467558 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
BRAT1-203ENST00000467558 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.18
BRAT1-203ENST00000467558 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 ARID3AQ99856 593 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 ZFYP08048 801 aaPredicted RBP16.2■□□□□ 0.18
BRAT1-203ENST00000467558 SSFA2P28290 1259 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
BRAT1-203ENST00000467558 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 ATP7BP35670 1465 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 RBM5P52756 815 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRAT1-203ENST00000467558 DDX46Q7L014 1031 aaKnown RBP16.2■□□□□ 0.18
BRAT1-203ENST00000467558 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
BRAT1-203ENST00000467558 AK7Q96M32 723 aa16.2■□□□□ 0.18
BRAT1-203ENST00000467558 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 ATP2B3Q16720 1220 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
BRAT1-203ENST00000467558 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 USP5P45974 858 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
BRAT1-203ENST00000467558 CDK5RAP3Q96JB5 506 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
BRAT1-203ENST00000467558 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
BRAT1-203ENST00000467558 ACSBG1Q96GR2 724 aa16.18■□□□□ 0.18
BRAT1-203ENST00000467558 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
BRAT1-203ENST00000467558 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
BRAT1-203ENST00000467558 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
BRAT1-203ENST00000467558 ZSCAN29Q8IWY8 852 aaPredicted RBP16.18■□□□□ 0.18
BRAT1-203ENST00000467558 C8orf76Q96K31 380 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 SNX21Q969T3 373 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 SMC2O95347 1197 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 RFC4P35249 363 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 MKNK2Q9HBH9 465 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
BRAT1-203ENST00000467558 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
BRAT1-203ENST00000467558 FILIP1LQ4L180 1135 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 NBPF5PQ86XG9 351 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-203ENST00000467558 PLEKHF1Q96S99 279 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 SLC52A2Q9HAB3 445 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms