RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L21D6R901 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 EFSO43281 561 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
SSB-207ENST00000465871 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 LAMC2Q13753 1193 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 LRRC69Q6ZNQ3 347 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
SSB-207ENST00000465871 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
SSB-207ENST00000465871 C21orf2O43822 256 aa11.69□□□□□ -0.54
SSB-207ENST00000465871 BEND7Q8N7W2 519 aaPredicted RBP11.69□□□□□ -0.54
SSB-207ENST00000465871 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
SSB-207ENST00000465871 DPYDQ12882 1025 aa11.68□□□□□ -0.54
SSB-207ENST00000465871 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
SSB-207ENST00000465871 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
SSB-207ENST00000465871 NEUROD4Q9HD90 331 aa11.68□□□□□ -0.54
SSB-207ENST00000465871 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
SSB-207ENST00000465871 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
SSB-207ENST00000465871 DNMT3AQ9Y6K1 912 aaPredicted RBP11.68□□□□□ -0.54
SSB-207ENST00000465871 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
SSB-207ENST00000465871 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
SSB-207ENST00000465871 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
SSB-207ENST00000465871 NEURL1BA8MQ27 555 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 EPXP11678 715 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 ADH6P28332 368 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 HCN4Q9Y3Q4 1203 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
SSB-207ENST00000465871 SCG3Q8WXD2 468 aaKnown RBP11.65□□□□□ -0.54
SSB-207ENST00000465871 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
SSB-207ENST00000465871 SNRPNP63162 240 aaKnown RBP11.64□□□□□ -0.55
SSB-207ENST00000465871 ZNF468Q5VIY5 522 aaPredicted RBP11.64□□□□□ -0.55
SSB-207ENST00000465871 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
SSB-207ENST00000465871 AMPD1P23109 780 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 ALDH16A1Q8IZ83 802 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 HSH2DQ96JZ2 352 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 ANKIB1Q9P2G1 1089 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 MKL2Q9ULH7 1088 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 PRR12Q9ULL5 1215 aa11.63□□□□□ -0.55
SSB-207ENST00000465871 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
SSB-207ENST00000465871 ARXQ96QS3 562 aa11.62□□□□□ -0.55
SSB-207ENST00000465871 KLF15Q9UIH9 416 aa11.62□□□□□ -0.55
SSB-207ENST00000465871 FCHSD1Q86WN1 690 aa11.61□□□□□ -0.55
SSB-207ENST00000465871 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
SSB-207ENST00000465871 IGFBP4P22692 258 aa11.6□□□□□ -0.55
SSB-207ENST00000465871 PCBP4P57723 403 aaKnown RBP11.6□□□□□ -0.55
SSB-207ENST00000465871 SUSD3Q96L08 255 aa11.6□□□□□ -0.55
SSB-207ENST00000465871 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
SSB-207ENST00000465871 BTBD6Q96KE9 485 aa11.59□□□□□ -0.55
SSB-207ENST00000465871 TYRO3Q06418 890 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
SSB-207ENST00000465871 HIF1AQ16665 826 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 BRD7Q9NPI1 651 aa11.58□□□□□ -0.56
SSB-207ENST00000465871 LGR5O75473 907 aa11.57□□□□□ -0.56
SSB-207ENST00000465871 DGKGP49619 791 aa11.57□□□□□ -0.56
SSB-207ENST00000465871 CHSY3Q70JA7 882 aa11.57□□□□□ -0.56
SSB-207ENST00000465871 GRIN2CQ14957 1233 aa11.56□□□□□ -0.56
SSB-207ENST00000465871 RTN1Q16799 776 aa11.56□□□□□ -0.56
SSB-207ENST00000465871 SYT9Q86SS6 491 aa11.56□□□□□ -0.56
SSB-207ENST00000465871 FAM200AQ8TCP9 573 aa11.56□□□□□ -0.56
SSB-207ENST00000465871 PIK3R2O00459 728 aa11.55□□□□□ -0.56
SSB-207ENST00000465871 RFX1P22670 979 aa11.55□□□□□ -0.56
SSB-207ENST00000465871 KCNQ4P56696 695 aa11.55□□□□□ -0.56
SSB-207ENST00000465871 LINC00114Q6XXX2 140 aa11.55□□□□□ -0.56
SSB-207ENST00000465871 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
SSB-207ENST00000465871 SIN3BO75182 1162 aa11.54□□□□□ -0.56
SSB-207ENST00000465871 SPEM2Q0P670 501 aa11.54□□□□□ -0.56
SSB-207ENST00000465871 CDCA8Q53HL2 280 aa11.54□□□□□ -0.56
SSB-207ENST00000465871 GPAT2Q6NUI2 795 aa11.54□□□□□ -0.56
SSB-207ENST00000465871 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
SSB-207ENST00000465871 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
SSB-207ENST00000465871 ELOA3DA6NLF2 546 aaPredicted RBP11.53□□□□□ -0.56
SSB-207ENST00000465871 GNB5O14775 395 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 FOXO3O43524 673 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 IGHA1P01876 353 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 WEE1P30291 646 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 ELOA3BQ3SY89 546 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 IER5Q5VY09 327 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 ELOA3Q8NG57 546 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 MDFIQ99750 246 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 NOVA2Q9UNW9 492 aaKnown RBP11.53□□□□□ -0.56
SSB-207ENST00000465871 KCNH4Q9UQ05 1017 aa11.53□□□□□ -0.56
SSB-207ENST00000465871 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
SSB-207ENST00000465871 PLA2G4EQ3MJ16 856 aa11.52□□□□□ -0.57
SSB-207ENST00000465871 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
SSB-207ENST00000465871 TGFBR3LH3BV60 316 aa11.51□□□□□ -0.57
SSB-207ENST00000465871 COL8A1P27658 744 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 586.3 ms