RNA–Protein interactions for RNA: ENST00000465669.1

RAPH1-212, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

TSL 2

Gene RAPH1, Length 360 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-212ENST00000465669 ZBTB3Q9H5J0 574 aa29.9■■■□□ 2.38
RAPH1-212ENST00000465669 CHPF2Q9P2E5 772 aa29.9■■■□□ 2.38
RAPH1-212ENST00000465669 CLEC4GQ6UXB4 293 aa29.89■■■□□ 2.38
RAPH1-212ENST00000465669 IL16Q14005 1332 aa29.89■■■□□ 2.38
RAPH1-212ENST00000465669 DPEP1P16444 411 aa29.88■■■□□ 2.37
RAPH1-212ENST00000465669 LRP10Q7Z4F1 713 aa29.88■■■□□ 2.37
RAPH1-212ENST00000465669 WDR63Q8IWG1 891 aa29.88■■■□□ 2.37
RAPH1-212ENST00000465669 CCDC24Q8N4L8 307 aa29.88■■■□□ 2.37
RAPH1-212ENST00000465669 MAP3K15Q6ZN16 1313 aa29.88■■■□□ 2.37
RAPH1-212ENST00000465669 AFDNP55196 1824 aaKnown RBP29.87■■■□□ 2.37
RAPH1-212ENST00000465669 TGFB2P61812 414 aa29.87■■■□□ 2.37
RAPH1-212ENST00000465669 AIMP1Q12904 312 aaKnown RBP29.87■■■□□ 2.37
RAPH1-212ENST00000465669 DDX21Q9NR30 783 aaKnown RBP eCLIP29.87■■■□□ 2.37
RAPH1-212ENST00000465669 NIP7Q9Y221 180 aaKnown RBP eCLIP29.87■■■□□ 2.37
RAPH1-212ENST00000465669 PXDNLA1KZ92 1463 aa29.87■■■□□ 2.37
RAPH1-212ENST00000465669 YBX3P16989 372 aaKnown RBP eCLIP29.86■■■□□ 2.37
RAPH1-212ENST00000465669 TSPYL6Q8N831 410 aa29.86■■■□□ 2.37
RAPH1-212ENST00000465669 XAGE3Q8WTP9 111 aa29.86■■■□□ 2.37
RAPH1-212ENST00000465669 KIF13BQ9NQT8 1826 aa29.86■■■□□ 2.37
RAPH1-212ENST00000465669 CARMIL3Q8ND23 1372 aa29.86■■■□□ 2.37
RAPH1-212ENST00000465669 FAM177BA6PVY3 158 aa29.85■■■□□ 2.37
RAPH1-212ENST00000465669 ERVV-1B6SEH8 477 aa29.85■■■□□ 2.37
RAPH1-212ENST00000465669 NPHP1O15259 732 aa29.85■■■□□ 2.37
RAPH1-212ENST00000465669 COPS6Q7L5N1 327 aa29.85■■■□□ 2.37
RAPH1-212ENST00000465669 N4BP2Q86UW6 1770 aaPredicted RBP29.84■■■□□ 2.37
RAPH1-212ENST00000465669 CHRNA5P30532 468 aa29.83■■■□□ 2.37
RAPH1-212ENST00000465669 PRR5LQ6MZQ0 368 aa29.83■■■□□ 2.37
RAPH1-212ENST00000465669 SPINK5Q9NQ38 1064 aaPredicted RBP29.82■■■□□ 2.36
RAPH1-212ENST00000465669 DBF4Q9UBU7 674 aaPredicted RBP29.82■■■□□ 2.36
RAPH1-212ENST00000465669 NRXN2Q9P2S2 1712 aa29.82■■■□□ 2.36
RAPH1-212ENST00000465669 FANCIQ9NVI1 1328 aa29.81■■■□□ 2.36
RAPH1-212ENST00000465669 RGL2O15211 777 aa29.81■■■□□ 2.36
RAPH1-212ENST00000465669 GPTP24298 496 aa29.81■■■□□ 2.36
RAPH1-212ENST00000465669 NBPF5PQ86XG9 351 aaPredicted RBP29.81■■■□□ 2.36
RAPH1-212ENST00000465669 CNBD1Q8NA66 436 aa29.81■■■□□ 2.36
RAPH1-212ENST00000465669 KIAA1551Q9HCM1 1747 aa29.81■■■□□ 2.36
RAPH1-212ENST00000465669 TCERG1O14776 1098 aaKnown RBP29.78■■■□□ 2.36
RAPH1-212ENST00000465669 KCNA3P22001 575 aa29.78■■■□□ 2.36
RAPH1-212ENST00000465669 TWISTNBQ3B726 338 aaPredicted RBP29.78■■■□□ 2.36
RAPH1-212ENST00000465669 GIGYF2Q6Y7W6 1299 aaKnown RBP29.78■■■□□ 2.36
RAPH1-212ENST00000465669 BCS1LQ9Y276 419 aa29.78■■■□□ 2.36
RAPH1-212ENST00000465669 NUP98P52948 1817 aa29.78■■■□□ 2.36
RAPH1-212ENST00000465669 ST5P78524 1137 aa29.77■■■□□ 2.36
RAPH1-212ENST00000465669 HYPKQ9NX55 129 aa29.77■■■□□ 2.36
RAPH1-212ENST00000465669 GRIN3BO60391 1043 aa29.76■■■□□ 2.35
RAPH1-212ENST00000465669 GOLGA2Q08379 1002 aa29.76■■■□□ 2.35
RAPH1-212ENST00000465669 CCDC30Q5VVM6 783 aa29.76■■■□□ 2.35
RAPH1-212ENST00000465669 C2CD5Q86YS7 1000 aa29.76■■■□□ 2.35
RAPH1-212ENST00000465669 EXOSC9Q06265 439 aaKnown RBP29.75■■■□□ 2.35
RAPH1-212ENST00000465669 TPTE2Q6XPS3 522 aa29.75■■■□□ 2.35
RAPH1-212ENST00000465669 PIM2Q9P1W9 311 aa29.75■■■□□ 2.35
RAPH1-212ENST00000465669 ZNF521Q96K83 1311 aa29.74■■■□□ 2.35
RAPH1-212ENST00000465669 ATP10DQ9P241 1426 aa29.74■■■□□ 2.35
RAPH1-212ENST00000465669 ZNF34Q8IZ26 560 aa29.74■■■□□ 2.35
RAPH1-212ENST00000465669 BRIP1Q9BX63 1249 aa29.74■■■□□ 2.35
RAPH1-212ENST00000465669 MYH16Q9H6N6 1097 aa29.74■■■□□ 2.35
RAPH1-212ENST00000465669 PHAXQ9H814 394 aaKnown RBP29.74■■■□□ 2.35
RAPH1-212ENST00000465669 UBN2Q6ZU65 1347 aa29.73■■■□□ 2.35
RAPH1-212ENST00000465669 GTF2E1P29083 439 aaPredicted RBP29.73■■■□□ 2.35
RAPH1-212ENST00000465669 H0YIN7 160 aa29.72■■■□□ 2.35
RAPH1-212ENST00000465669 PDE6BP35913 854 aa29.72■■■□□ 2.35
RAPH1-212ENST00000465669 SUSD4Q5VX71 490 aa29.71■■■□□ 2.35
RAPH1-212ENST00000465669 ANKRD13DQ6ZTN6 518 aa29.71■■■□□ 2.35
RAPH1-212ENST00000465669 NUTM1Q86Y26 1132 aa29.71■■■□□ 2.35
RAPH1-212ENST00000465669 PLBD2Q8NHP8 589 aa29.71■■■□□ 2.35
RAPH1-212ENST00000465669 CHMP4AQ9BY43 222 aa29.71■■■□□ 2.35
RAPH1-212ENST00000465669 ANKRD31Q8N7Z5 1873 aa29.7■■■□□ 2.35
RAPH1-212ENST00000465669 DALRD3Q5D0E6 543 aaKnown RBP29.7■■■□□ 2.35
RAPH1-212ENST00000465669 YY1P25490 414 aa29.69■■■□□ 2.34
RAPH1-212ENST00000465669 HSP90AB3PQ58FF7 597 aa29.69■■■□□ 2.34
RAPH1-212ENST00000465669 ZNF622Q969S3 477 aaKnown RBP eCLIP29.69■■■□□ 2.34
RAPH1-212ENST00000465669 ZNF428Q96B54 188 aa29.69■■■□□ 2.34
RAPH1-212ENST00000465669 STK31Q9BXU1 1019 aa29.69■■■□□ 2.34
RAPH1-212ENST00000465669 NYXQ9GZU5 481 aa29.69■■■□□ 2.34
RAPH1-212ENST00000465669 TCIRG1Q13488 830 aa29.68■■■□□ 2.34
RAPH1-212ENST00000465669 VAMP4O75379 141 aa29.67■■■□□ 2.34
RAPH1-212ENST00000465669 ERFEQ4G0M1 354 aa29.67■■■□□ 2.34
RAPH1-212ENST00000465669 PARP10Q53GL7 1025 aa29.67■■■□□ 2.34
RAPH1-212ENST00000465669 PPP1R42Q7Z4L9 355 aa29.66■■■□□ 2.34
RAPH1-212ENST00000465669 RIC3Q7Z5B4 369 aa29.66■■■□□ 2.34
RAPH1-212ENST00000465669 BRCA1P38398 1863 aaKnown RBP29.65■■■□□ 2.34
RAPH1-212ENST00000465669 ABCC12Q96J65 1359 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 ATP5J2-PTCD1G3V325 749 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 NTSR2O95665 410 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 SLC4A2P04920 1241 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 TTLL6Q8N841 843 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 UTP14AQ9BVJ6 771 aaKnown RBP29.64■■■□□ 2.34
RAPH1-212ENST00000465669 PDZRN3Q9UPQ7 1066 aa29.64■■■□□ 2.34
RAPH1-212ENST00000465669 ARHGAP27Q6ZUM4 889 aa29.63■■■□□ 2.33
RAPH1-212ENST00000465669 G2E3Q7L622 706 aa29.63■■■□□ 2.33
RAPH1-212ENST00000465669 NLRP10Q86W26 655 aa29.63■■■□□ 2.33
RAPH1-212ENST00000465669 CDCA7LQ96GN5 454 aa29.63■■■□□ 2.33
RAPH1-212ENST00000465669 E9PSI1 815 aa29.62■■■□□ 2.33
RAPH1-212ENST00000465669 SRGNP10124 158 aa29.61■■■□□ 2.33
RAPH1-212ENST00000465669 ZNF219Q9P2Y4 722 aaPredicted RBP29.61■■■□□ 2.33
RAPH1-212ENST00000465669 COL11A2P13942 1736 aaPredicted RBP29.61■■■□□ 2.33
RAPH1-212ENST00000465669 IBTKQ9P2D0 1353 aaPredicted RBP29.61■■■□□ 2.33
RAPH1-212ENST00000465669 CHD4Q14839 1912 aa29.61■■■□□ 2.33
RAPH1-212ENST00000465669 ANKRD36CQ5JPF3 1778 aa29.6■■■□□ 2.33
RAPH1-212ENST00000465669 DDX58O95786 925 aaKnown RBP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms