RNA–Protein interactions for RNA: ENST00000465551.5

FXR1-206, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-206ENST00000465551 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 SIK1P57059 783 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 CABP4P57796 275 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 HTRA3P83110 453 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 FOXK1P85037 733 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
FXR1-206ENST00000465551 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 AK7Q96M32 723 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
FXR1-206ENST00000465551 PHF14O94880 888 aa12.41□□□□□ -0.42
FXR1-206ENST00000465551 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
FXR1-206ENST00000465551 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
FXR1-206ENST00000465551 LINC00116Q8NCU8 138 aa12.41□□□□□ -0.42
FXR1-206ENST00000465551 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
FXR1-206ENST00000465551 MYH14Q7Z406 1995 aaKnown RBP12.4□□□□□ -0.42
FXR1-206ENST00000465551 ERVV-2B6SEH9 535 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 MFSD10Q14728 455 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
FXR1-206ENST00000465551 PLPP6Q8IY26 295 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
FXR1-206ENST00000465551 NMRK2Q9NPI5 230 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
FXR1-206ENST00000465551 MRC1P22897 1456 aa12.4□□□□□ -0.43
FXR1-206ENST00000465551 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 SNPHO15079 494 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 ITPK1Q13572 414 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 AMIGO3Q86WK7 504 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 WDR70Q9NW82 654 aa12.39□□□□□ -0.43
FXR1-206ENST00000465551 GNPATO15228 680 aa12.38□□□□□ -0.43
FXR1-206ENST00000465551 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
FXR1-206ENST00000465551 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
FXR1-206ENST00000465551 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
FXR1-206ENST00000465551 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
FXR1-206ENST00000465551 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
FXR1-206ENST00000465551 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
FXR1-206ENST00000465551 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
FXR1-206ENST00000465551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
FXR1-206ENST00000465551 FAM161AQ3B820 660 aa12.36□□□□□ -0.43
FXR1-206ENST00000465551 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
FXR1-206ENST00000465551 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
FXR1-206ENST00000465551 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
FXR1-206ENST00000465551 PXDNLA1KZ92 1463 aa12.35□□□□□ -0.43
FXR1-206ENST00000465551 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
FXR1-206ENST00000465551 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
FXR1-206ENST00000465551 KCPQ6ZWJ8 1503 aa12.35□□□□□ -0.43
FXR1-206ENST00000465551 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
FXR1-206ENST00000465551 SSFA2P28290 1259 aa12.34□□□□□ -0.43
FXR1-206ENST00000465551 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
FXR1-206ENST00000465551 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
FXR1-206ENST00000465551 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
FXR1-206ENST00000465551 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
FXR1-206ENST00000465551 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
FXR1-206ENST00000465551 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
FXR1-206ENST00000465551 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
FXR1-206ENST00000465551 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
FXR1-206ENST00000465551 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
FXR1-206ENST00000465551 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
FXR1-206ENST00000465551 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
FXR1-206ENST00000465551 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
FXR1-206ENST00000465551 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
FXR1-206ENST00000465551 RTCBQ9Y3I0 505 aaKnown RBP12.32□□□□□ -0.44
FXR1-206ENST00000465551 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
FXR1-206ENST00000465551 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
FXR1-206ENST00000465551 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
FXR1-206ENST00000465551 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
FXR1-206ENST00000465551 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
FXR1-206ENST00000465551 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
FXR1-206ENST00000465551 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
FXR1-206ENST00000465551 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
FXR1-206ENST00000465551 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
FXR1-206ENST00000465551 TEFQ10587 303 aa12.3□□□□□ -0.44
FXR1-206ENST00000465551 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
FXR1-206ENST00000465551 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
FXR1-206ENST00000465551 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
FXR1-206ENST00000465551 RGS19P49795 217 aa12.29□□□□□ -0.44
FXR1-206ENST00000465551 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
FXR1-206ENST00000465551 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
FXR1-206ENST00000465551 RC3H1Q5TC82 1133 aaKnown RBP12.28□□□□□ -0.44
FXR1-206ENST00000465551 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
FXR1-206ENST00000465551 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
FXR1-206ENST00000465551 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
FXR1-206ENST00000465551 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
FXR1-206ENST00000465551 SCN7AQ01118 1682 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 RFC4P35249 363 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 E2F4Q16254 413 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
FXR1-206ENST00000465551 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 SRP68Q9UHB9 627 aaKnown RBP12.27□□□□□ -0.45
FXR1-206ENST00000465551 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
FXR1-206ENST00000465551 MMP10P09238 476 aa12.26□□□□□ -0.45
FXR1-206ENST00000465551 MCM10Q7L590 875 aa12.26□□□□□ -0.45
FXR1-206ENST00000465551 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
FXR1-206ENST00000465551 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
FXR1-206ENST00000465551 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
FXR1-206ENST00000465551 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
FXR1-206ENST00000465551 FCHSD2O94868 740 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms