RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 DLG5Q8TDM6 1919 aa20.39■□□□□ 0.86
HOXB3-204ENST00000465120 SBF1O95248 1867 aa20.39■□□□□ 0.86
HOXB3-204ENST00000465120 FAM177BA6PVY3 158 aa20.39■□□□□ 0.85
HOXB3-204ENST00000465120 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
HOXB3-204ENST00000465120 ANKRD31Q8N7Z5 1873 aa20.38■□□□□ 0.85
HOXB3-204ENST00000465120 BCORQ6W2J9 1755 aa20.37■□□□□ 0.85
HOXB3-204ENST00000465120 CNKSR1Q969H4 720 aa20.37■□□□□ 0.85
HOXB3-204ENST00000465120 RRP7AQ9Y3A4 280 aaKnown RBP20.37■□□□□ 0.85
HOXB3-204ENST00000465120 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
HOXB3-204ENST00000465120 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
HOXB3-204ENST00000465120 NFKBIEO00221 500 aa20.35■□□□□ 0.85
HOXB3-204ENST00000465120 RIPK4P57078 832 aa20.35■□□□□ 0.85
HOXB3-204ENST00000465120 EIF4A1P60842 406 aaKnown RBP20.35■□□□□ 0.85
HOXB3-204ENST00000465120 STYK1Q6J9G0 422 aa20.35■□□□□ 0.85
HOXB3-204ENST00000465120 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
HOXB3-204ENST00000465120 MASTLQ96GX5 879 aa20.35■□□□□ 0.85
HOXB3-204ENST00000465120 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
HOXB3-204ENST00000465120 SRGNP10124 158 aa20.34■□□□□ 0.85
HOXB3-204ENST00000465120 MYL6BP14649 208 aa20.34■□□□□ 0.85
HOXB3-204ENST00000465120 APLP1P51693 650 aa20.34■□□□□ 0.85
HOXB3-204ENST00000465120 PRELPP51888 382 aa20.34■□□□□ 0.85
HOXB3-204ENST00000465120 HLFQ16534 295 aa20.34■□□□□ 0.85
HOXB3-204ENST00000465120 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
HOXB3-204ENST00000465120 PRPF40BQ6NWY9 871 aaKnown RBP20.33■□□□□ 0.85
HOXB3-204ENST00000465120 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
HOXB3-204ENST00000465120 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
HOXB3-204ENST00000465120 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.84
HOXB3-204ENST00000465120 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
HOXB3-204ENST00000465120 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
HOXB3-204ENST00000465120 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 ERFEQ4G0M1 354 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
HOXB3-204ENST00000465120 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
HOXB3-204ENST00000465120 MYBBP1AQ9BQG0 1328 aaKnown RBP20.3■□□□□ 0.84
HOXB3-204ENST00000465120 RGL2O15211 777 aa20.3■□□□□ 0.84
HOXB3-204ENST00000465120 NPR1P16066 1061 aa20.3■□□□□ 0.84
HOXB3-204ENST00000465120 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
HOXB3-204ENST00000465120 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
HOXB3-204ENST00000465120 EIF2S2P20042 333 aaKnown RBP20.29■□□□□ 0.84
HOXB3-204ENST00000465120 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 FSTL1Q12841 308 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.844e-9■■□□□ 12.8
HOXB3-204ENST00000465120 TTLL7Q6ZT98 887 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 ZBTB3Q9H5J0 574 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 SLX4Q8IY92 1834 aa20.29■□□□□ 0.84
HOXB3-204ENST00000465120 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
HOXB3-204ENST00000465120 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
HOXB3-204ENST00000465120 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
HOXB3-204ENST00000465120 NYXQ9GZU5 481 aa20.28■□□□□ 0.84
HOXB3-204ENST00000465120 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.84
HOXB3-204ENST00000465120 GPTP24298 496 aa20.27■□□□□ 0.84
HOXB3-204ENST00000465120 SMC1BQ8NDV3 1235 aa20.27■□□□□ 0.84
HOXB3-204ENST00000465120 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
HOXB3-204ENST00000465120 CCDC93Q567U6 631 aa20.26■□□□□ 0.83
HOXB3-204ENST00000465120 NUTM1Q86Y26 1132 aa20.26■□□□□ 0.83
HOXB3-204ENST00000465120 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
HOXB3-204ENST00000465120 LTBP3Q9NS15 1303 aa20.26■□□□□ 0.83
HOXB3-204ENST00000465120 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
HOXB3-204ENST00000465120 KLRG2A4D1S0 409 aaPredicted RBP20.24■□□□□ 0.83
HOXB3-204ENST00000465120 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
HOXB3-204ENST00000465120 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
HOXB3-204ENST00000465120 NUP98P52948 1817 aa20.23■□□□□ 0.83
HOXB3-204ENST00000465120 HTRA3P83110 453 aa20.23■□□□□ 0.83
HOXB3-204ENST00000465120 RUNDC1Q96C34 613 aa20.23■□□□□ 0.83
HOXB3-204ENST00000465120 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
HOXB3-204ENST00000465120 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
HOXB3-204ENST00000465120 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
HOXB3-204ENST00000465120 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
HOXB3-204ENST00000465120 DDNO94850 711 aaPredicted RBP20.21■□□□□ 0.83
HOXB3-204ENST00000465120 ANXA1P04083 346 aa20.21■□□□□ 0.83
HOXB3-204ENST00000465120 SUSD4Q5VX71 490 aa20.21■□□□□ 0.83
HOXB3-204ENST00000465120 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
HOXB3-204ENST00000465120 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
HOXB3-204ENST00000465120 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
HOXB3-204ENST00000465120 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
HOXB3-204ENST00000465120 FKBP4Q02790 459 aaKnown RBP eCLIP20.2■□□□□ 0.82
HOXB3-204ENST00000465120 AIMP1Q12904 312 aaKnown RBP20.2■□□□□ 0.82
HOXB3-204ENST00000465120 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
HOXB3-204ENST00000465120 DNAJC5GQ8N7S2 189 aa20.2■□□□□ 0.82
HOXB3-204ENST00000465120 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
HOXB3-204ENST00000465120 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
HOXB3-204ENST00000465120 UBN2Q6ZU65 1347 aa20.2■□□□□ 0.82
HOXB3-204ENST00000465120 ABCC12Q96J65 1359 aa20.2■□□□□ 0.82
HOXB3-204ENST00000465120 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
HOXB3-204ENST00000465120 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
HOXB3-204ENST00000465120 POTECB2RU33 542 aa20.18■□□□□ 0.82
HOXB3-204ENST00000465120 PDIA6Q15084 440 aa20.18■□□□□ 0.82
HOXB3-204ENST00000465120 PROSER3Q2NL68 480 aa20.18■□□□□ 0.82
HOXB3-204ENST00000465120 TCERG1O14776 1098 aaKnown RBP20.17■□□□□ 0.82
HOXB3-204ENST00000465120 PARP10Q53GL7 1025 aa20.17■□□□□ 0.82
HOXB3-204ENST00000465120 SYNE4Q8N205 404 aa20.17■□□□□ 0.82
HOXB3-204ENST00000465120 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
HOXB3-204ENST00000465120 CHL1O00533 1208 aa20.16■□□□□ 0.82
HOXB3-204ENST00000465120 CRY2Q49AN0 593 aa20.16■□□□□ 0.82
HOXB3-204ENST00000465120 COPS6Q7L5N1 327 aa20.16■□□□□ 0.82
HOXB3-204ENST00000465120 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms