RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 MAPTP10636 758 aaKnown RBP7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 BMP4P12644 408 aa7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 GOLGA6L1Q8N7Z2 621 aa7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 ARXQ96QS3 562 aa7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 AVENQ9NQS1 362 aaPredicted RBP7.46□□□□□ -1.22
TM9SF3-203ENST00000464654 C2CD2LO14523 706 aa7.45□□□□□ -1.22
TM9SF3-203ENST00000464654 ARAFP10398 606 aa7.45□□□□□ -1.22
TM9SF3-203ENST00000464654 CTBSQ01459 385 aa7.45□□□□□ -1.22
TM9SF3-203ENST00000464654 SCARF2Q96GP6 870 aaPredicted RBP7.45□□□□□ -1.22
TM9SF3-203ENST00000464654 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
TM9SF3-203ENST00000464654 IGFBP4P22692 258 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 MARSP56192 900 aaKnown RBP7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 HIF1AQ16665 826 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 SH3PXD2AQ5TCZ1 1133 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 SLCO4C1Q6ZQN7 724 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 SCG3Q8WXD2 468 aaKnown RBP7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 NEUROD4Q9HD90 331 aa7.44□□□□□ -1.22
TM9SF3-203ENST00000464654 DCDC2BA2VCK2 349 aa7.43□□□□□ -1.22
TM9SF3-203ENST00000464654 KHNYNO15037 678 aaKnown RBP7.43□□□□□ -1.22
TM9SF3-203ENST00000464654 ELOAQ14241 798 aaKnown RBP7.43□□□□□ -1.22
TM9SF3-203ENST00000464654 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
TM9SF3-203ENST00000464654 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
TM9SF3-203ENST00000464654 GDF11O95390 407 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 GSK3AP49840 483 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 SRPK2P78362 688 aaKnown RBP7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 KANK3Q6NY19 840 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 LRRC69Q6ZNQ3 347 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 HCN2Q9UL51 889 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 HCN4Q9Y3Q4 1203 aa7.42□□□□□ -1.22
TM9SF3-203ENST00000464654 RFX1P22670 979 aa7.41□□□□□ -1.22
TM9SF3-203ENST00000464654 WEE1P30291 646 aa7.41□□□□□ -1.22
TM9SF3-203ENST00000464654 ALDH16A1Q8IZ83 802 aa7.41□□□□□ -1.22
TM9SF3-203ENST00000464654 NEDD1Q8NHV4 660 aa7.41□□□□□ -1.22
TM9SF3-203ENST00000464654 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
TM9SF3-203ENST00000464654 PHF20L1A8MW92 1017 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 FOXO3O43524 673 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 EPXP11678 715 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 CD33P20138 364 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 ADH6P28332 368 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 KCNQ4P56696 695 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 RASSF7Q02833 373 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 BEND7Q8N7W2 519 aaPredicted RBP7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 GALNT6Q8NCL4 622 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
TM9SF3-203ENST00000464654 RTN1Q16799 776 aa7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 IER5Q5VY09 327 aa7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 PODNQ7Z5L7 613 aa7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 CCDC97Q96F63 343 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 SUSD3Q96L08 255 aa7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
TM9SF3-203ENST00000464654 ACIN1Q9UKV3 1341 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 SHISA8B8ZZ34 492 aa7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 ATG7O95352 703 aa7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 CHMP7Q8WUX9 453 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 STRN4Q9NRL3 753 aa7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 PRR12Q9ULL5 1215 aa7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-203ENST00000464654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.37□□□□□ -1.232e-8■■■■■ 104.6
TM9SF3-203ENST00000464654 NEURL1BA8MQ27 555 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 IRS1P35568 1242 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 TYRO3Q06418 890 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 CDCA8Q53HL2 280 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 ZNF280CQ8ND82 737 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 PBXIP1Q96AQ6 731 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 HSH2DQ96JZ2 352 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 CEP63Q96MT8 703 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 EFCC1Q9HA90 598 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 BRD7Q9NPI1 651 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 ZMIZ1Q9ULJ6 1067 aa7.36□□□□□ -1.23
TM9SF3-203ENST00000464654 CNTNAP5Q8WYK1 1306 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 TGFBR3LH3BV60 316 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 PIK3R2O00459 728 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 SIN3BO75182 1162 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 SFSWAPQ12872 951 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 BTLAQ7Z6A9 289 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 MYO19Q96H55 970 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 MDFIQ99750 246 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
TM9SF3-203ENST00000464654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 HOXB4P17483 251 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 FAM69CQ0P6D2 419 aa7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 ALYREFQ86V81 257 aaKnown RBP7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 NGLY1Q96IV0 654 aa7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 KCNH4Q9UQ05 1017 aa7.34□□□□□ -1.23
TM9SF3-203ENST00000464654 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
TM9SF3-203ENST00000464654 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms