RNA–Protein interactions for RNA: ENST00000464632.5

APTX-212, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-212ENST00000464632 KNSTRNQ9Y448 316 aa14.39□□□□□ -0.11
APTX-212ENST00000464632 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
APTX-212ENST00000464632 NPHP1O15259 732 aa14.38□□□□□ -0.11
APTX-212ENST00000464632 ST5P78524 1137 aa14.38□□□□□ -0.11
APTX-212ENST00000464632 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
APTX-212ENST00000464632 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
APTX-212ENST00000464632 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
APTX-212ENST00000464632 HEG1Q9ULI3 1381 aa14.37□□□□□ -0.11
APTX-212ENST00000464632 CAMTA2O94983 1202 aa14.37□□□□□ -0.11
APTX-212ENST00000464632 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
APTX-212ENST00000464632 C7orf43Q8WVR3 580 aa14.37□□□□□ -0.11
APTX-212ENST00000464632 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
APTX-212ENST00000464632 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
APTX-212ENST00000464632 RASSF10A6NK89 507 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 EIF4G2P78344 907 aaKnown RBP eCLIP14.36□□□□□ -0.11
APTX-212ENST00000464632 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 CCDC93Q567U6 631 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 EAPPQ56P03 285 aaPredicted RBP14.36□□□□□ -0.11
APTX-212ENST00000464632 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 ABHD8Q96I13 439 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 HACL1Q9UJ83 578 aa14.36□□□□□ -0.11
APTX-212ENST00000464632 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
APTX-212ENST00000464632 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
APTX-212ENST00000464632 TEFQ10587 303 aa14.35□□□□□ -0.11
APTX-212ENST00000464632 A1BGP04217 495 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 NPR1P16066 1061 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 EPHX2P34913 555 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
APTX-212ENST00000464632 FKBP4Q02790 459 aaKnown RBP eCLIP14.34□□□□□ -0.11
APTX-212ENST00000464632 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
APTX-212ENST00000464632 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
APTX-212ENST00000464632 CNTROBQ8N137 903 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
APTX-212ENST00000464632 DIAPH1O60610 1272 aaKnown RBP14.33□□□□□ -0.12
APTX-212ENST00000464632 FAM161AQ3B820 660 aa14.33□□□□□ -0.12
APTX-212ENST00000464632 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
APTX-212ENST00000464632 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
APTX-212ENST00000464632 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
APTX-212ENST00000464632 WDR33Q9C0J8 1336 aaKnown RBP14.33□□□□□ -0.12
APTX-212ENST00000464632 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
APTX-212ENST00000464632 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
APTX-212ENST00000464632 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
APTX-212ENST00000464632 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
APTX-212ENST00000464632 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
APTX-212ENST00000464632 NBPF5PQ86XG9 351 aaPredicted RBP14.32□□□□□ -0.12
APTX-212ENST00000464632 FZD9O00144 591 aa14.31□□□□□ -0.12
APTX-212ENST00000464632 RTKN2Q8IZC4 609 aa14.31□□□□□ -0.12
APTX-212ENST00000464632 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
APTX-212ENST00000464632 RNF123Q5XPI4 1314 aa14.31□□□□□ -0.12
APTX-212ENST00000464632 SIPA1L3O60292 1781 aaPredicted RBP14.3□□□□□ -0.12
APTX-212ENST00000464632 BCORQ6W2J9 1755 aa14.3□□□□□ -0.12
APTX-212ENST00000464632 GPC2Q8N158 579 aa14.3□□□□□ -0.12
APTX-212ENST00000464632 GAS2L2Q8NHY3 880 aa14.3□□□□□ -0.12
APTX-212ENST00000464632 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
APTX-212ENST00000464632 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
APTX-212ENST00000464632 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
APTX-212ENST00000464632 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
APTX-212ENST00000464632 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
APTX-212ENST00000464632 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
APTX-212ENST00000464632 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
APTX-212ENST00000464632 KCNQ3O43525 872 aa14.28□□□□□ -0.12
APTX-212ENST00000464632 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
APTX-212ENST00000464632 RGS19P49795 217 aa14.28□□□□□ -0.12
APTX-212ENST00000464632 MLLT1Q03111 559 aaPredicted RBP14.28□□□□□ -0.12
APTX-212ENST00000464632 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
APTX-212ENST00000464632 BTBD11A6QL63 1104 aa14.27□□□□□ -0.13
APTX-212ENST00000464632 ECE1P42892 770 aa14.27□□□□□ -0.13
APTX-212ENST00000464632 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
APTX-212ENST00000464632 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
APTX-212ENST00000464632 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
APTX-212ENST00000464632 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
APTX-212ENST00000464632 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
APTX-212ENST00000464632 RGL2O15211 777 aa14.26□□□□□ -0.13
APTX-212ENST00000464632 CAPNS2Q96L46 248 aa14.26□□□□□ -0.13
APTX-212ENST00000464632 PSMD1Q99460 953 aa14.26□□□□□ -0.13
APTX-212ENST00000464632 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
APTX-212ENST00000464632 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
APTX-212ENST00000464632 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
APTX-212ENST00000464632 GPR101Q96P66 508 aaPredicted RBP14.25□□□□□ -0.13
APTX-212ENST00000464632 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
APTX-212ENST00000464632 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
APTX-212ENST00000464632 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
APTX-212ENST00000464632 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
APTX-212ENST00000464632 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
APTX-212ENST00000464632 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
APTX-212ENST00000464632 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
APTX-212ENST00000464632 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
APTX-212ENST00000464632 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
APTX-212ENST00000464632 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
APTX-212ENST00000464632 PER1O15534 1290 aaPredicted RBP14.23□□□□□ -0.13
APTX-212ENST00000464632 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
APTX-212ENST00000464632 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
APTX-212ENST00000464632 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
APTX-212ENST00000464632 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
APTX-212ENST00000464632 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
APTX-212ENST00000464632 MAP2K2P36507 400 aa14.22□□□□□ -0.13
APTX-212ENST00000464632 EPS15P42566 896 aa14.22□□□□□ -0.13
APTX-212ENST00000464632 SCNN1DP51172 638 aa14.22□□□□□ -0.13
APTX-212ENST00000464632 GRM1Q13255 1194 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms