RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 SSH2Q76I76 1423 aa13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 HCLS1P14317 486 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 C16orf71Q8IYS4 520 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 ZNF784Q8NCA9 323 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 RGPD8O14715 1765 aaPredicted RBP13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 SPATA31A1Q5TZJ5 1347 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 KCNF1Q9H3M0 494 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 CALCOCO1Q9P1Z2 691 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 PYCARDQ9ULZ3 195 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
TNRC6A-205ENST00000464539 TERF2Q15554 542 aa13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
TNRC6A-205ENST00000464539 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
TNRC6A-205ENST00000464539 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
TNRC6A-205ENST00000464539 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
TNRC6A-205ENST00000464539 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 KIF18AQ8NI77 898 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 FAM53CQ9NYF3 392 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 HMMRO75330 724 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 CCDC192P0DO97 292 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 CEP85Q6P2H3 762 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 MPNDQ8N594 471 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
TNRC6A-205ENST00000464539 ATP10DQ9P241 1426 aa13.75□□□□□ -0.21
TNRC6A-205ENST00000464539 ZSCAN22P10073 491 aaPredicted RBP13.75□□□□□ -0.21
TNRC6A-205ENST00000464539 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
TNRC6A-205ENST00000464539 CCDC112Q8NEF3 446 aa13.75□□□□□ -0.21
TNRC6A-205ENST00000464539 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
TNRC6A-205ENST00000464539 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 KCNJ4P48050 445 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 TSPYL6Q8N831 410 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 TULP2O00295 520 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 PDE1AP54750 535 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 SLFNL1Q499Z3 407 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 BARGINQ6ZT62 677 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
TNRC6A-205ENST00000464539 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 FYB1O15117 783 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 IGSF3O75054 1194 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 TNNT1P13805 278 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 FAM200AQ8TCP9 573 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 A0A1W2PP64 1363 aa13.73□□□□□ -0.21
TNRC6A-205ENST00000464539 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 CPSF1Q10570 1443 aaKnown RBP13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 AP5Z1O43299 807 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
TNRC6A-205ENST00000464539 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
TNRC6A-205ENST00000464539 PTPRCP08575 1304 aa13.71□□□□□ -0.21
TNRC6A-205ENST00000464539 KIAA0232Q92628 1395 aa13.71□□□□□ -0.22
TNRC6A-205ENST00000464539 STX6O43752 255 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 NEMFO60524 1076 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 F13A1P00488 732 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 CCDC171Q6TFL3 1326 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 PTGS1P23219 599 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 SPC24Q8NBT2 197 aa13.7□□□□□ -0.22
TNRC6A-205ENST00000464539 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
TNRC6A-205ENST00000464539 CHMLP26374 656 aa13.69□□□□□ -0.22
TNRC6A-205ENST00000464539 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
TNRC6A-205ENST00000464539 TAF7LQ5H9L4 462 aa13.69□□□□□ -0.22
TNRC6A-205ENST00000464539 CAVIN2O95810 425 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 CDC25BP30305 580 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 EVA1CP58658 441 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 CCDC186Q7Z3E2 898 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
TNRC6A-205ENST00000464539 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms