RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SPC24Q8NBT2 197 aa15□□□□□ -0.01
NUP58-206ENST00000463407 PPFIBP1Q86W92 1011 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 ABCC2Q92887 1545 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
NUP58-206ENST00000463407 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
NUP58-206ENST00000463407 CATIPQ7Z7H3 387 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
NUP58-206ENST00000463407 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
NUP58-206ENST00000463407 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
NUP58-206ENST00000463407 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 GRM1Q13255 1194 aa14.99□□□□□ -0.01
NUP58-206ENST00000463407 ABCC1P33527 1531 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 HMGB1P09429 215 aaKnown RBP14.98□□□□□ -0.01
NUP58-206ENST00000463407 SSRP1Q08945 709 aaKnown RBP14.98□□□□□ -0.01
NUP58-206ENST00000463407 PDE4BQ07343 736 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 GCP02774 474 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 MYO6Q9UM54 1294 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 NUP160Q12769 1436 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 UQCRFS1P1P0C7P4 283 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 CDR1P51861 262 aa14.98□□□□□ -0.01
NUP58-206ENST00000463407 IL16Q14005 1332 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 GOLGA8AA7E2F4 631 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 GOLGA8BA8MQT2 603 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 CCP110O43303 1012 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
NUP58-206ENST00000463407 CFAP43Q8NDM7 1665 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 TSPY2A6NKD2 308 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 VAT1LQ9HCJ6 419 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 NLRP5P59047 1200 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 DHX8Q14562 1220 aaKnown RBP14.97□□□□□ -0.01
NUP58-206ENST00000463407 ECHDC1Q9NTX5 307 aa14.97□□□□□ -0.01
NUP58-206ENST00000463407 CRNKL1Q9BZJ0 848 aaKnown RBP14.97□□□□□ -0.01
NUP58-206ENST00000463407 TRIM21P19474 475 aaKnown RBP14.96□□□□□ -0.01
NUP58-206ENST00000463407 C16orf71Q8IYS4 520 aaPredicted RBP14.96□□□□□ -0.01
NUP58-206ENST00000463407 TEX35Q5T0J7 233 aa14.96□□□□□ -0.01
NUP58-206ENST00000463407 PBRM1Q86U86 1689 aa14.96□□□□□ -0.01
NUP58-206ENST00000463407 NOM1Q5C9Z4 860 aaKnown RBP14.96□□□□□ -0.01
NUP58-206ENST00000463407 ACBD3Q9H3P7 528 aa14.96□□□□□ -0.01
NUP58-206ENST00000463407 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
NUP58-206ENST00000463407 OGFOD1Q8N543 542 aa14.96□□□□□ -0.02
NUP58-206ENST00000463407 LUC7LQ9NQ29 371 aaKnown RBP14.96□□□□□ -0.02
NUP58-206ENST00000463407 TRPM2O94759 1503 aa14.96□□□□□ -0.02
NUP58-206ENST00000463407 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
NUP58-206ENST00000463407 TPTE2Q6XPS3 522 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 MTHFSDQ2M296 383 aaKnown RBP14.95□□□□□ -0.02
NUP58-206ENST00000463407 IQSEC3Q9UPP2 1182 aaPredicted RBP14.95□□□□□ -0.02
NUP58-206ENST00000463407 PCDH11XQ9BZA7 1347 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 PCDH11YQ9BZA8 1340 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 ATP10AO60312 1499 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
NUP58-206ENST00000463407 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 FLT4P35916 1363 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
NUP58-206ENST00000463407 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
NUP58-206ENST00000463407 MFSD6Q6ZSS7 791 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 GUCY1B3Q02153 619 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 ZGPATQ8N5A5 531 aaKnown RBP14.94□□□□□ -0.02
NUP58-206ENST00000463407 TMEM266Q2M3C6 531 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
NUP58-206ENST00000463407 NPATQ14207 1427 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 ZNF771Q7L3S4 317 aaPredicted RBP14.94□□□□□ -0.02
NUP58-206ENST00000463407 CCDC194A0A1B0GVG4 234 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 TMEM67Q5HYA8 995 aa14.94□□□□□ -0.02
NUP58-206ENST00000463407 CBFA2T2O43439 604 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
NUP58-206ENST00000463407 DESP17661 470 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 HAND2P61296 217 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 UBA5Q9GZZ9 404 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 CYP7A1P22680 504 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 CCT2P78371 535 aaKnown RBP14.93□□□□□ -0.02
NUP58-206ENST00000463407 PICALMQ13492 652 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 SKIDA1Q1XH10 827 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 TRAPPC3LQ5T215 181 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 RBM26Q5T8P6 1007 aaKnown RBP14.93□□□□□ -0.02
NUP58-206ENST00000463407 FERMT3Q86UX7 667 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 GNPATO15228 680 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 KIF5BP33176 963 aa14.93□□□□□ -0.02
NUP58-206ENST00000463407 PPP1R12BO60237 982 aaPredicted RBP14.92□□□□□ -0.02
NUP58-206ENST00000463407 BAG4O95429 457 aaKnown RBP14.92□□□□□ -0.02
NUP58-206ENST00000463407 RAB34Q9BZG1 259 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 HOXC9P31274 260 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 DCAF5Q96JK2 942 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 STK32BQ9NY57 414 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
NUP58-206ENST00000463407 POLKQ9UBT6 870 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 LIG1P18858 919 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 ATP2B3Q16720 1220 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 KSR2Q6VAB6 950 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 DNAI2Q9GZS0 605 aa14.92□□□□□ -0.02
NUP58-206ENST00000463407 NEBLO76041 1014 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
NUP58-206ENST00000463407 JDP2Q8WYK2 163 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms