RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ZNF277Q9NRM2 450 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-211ENST00000463372 SAGE1Q9NXZ1 904 aa18.85■□□□□ 0.61
C9orf3-211ENST00000463372 COL15A1P39059 1388 aa18.84■□□□□ 0.61
C9orf3-211ENST00000463372 STYK1Q6J9G0 422 aa18.84■□□□□ 0.61
C9orf3-211ENST00000463372 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
C9orf3-211ENST00000463372 FZD9O00144 591 aa18.83■□□□□ 0.6
C9orf3-211ENST00000463372 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.63e-6■■□□□ 13.3
C9orf3-211ENST00000463372 BCL2L12Q9HB09 334 aa18.83■□□□□ 0.6
C9orf3-211ENST00000463372 MKI67P46013 3256 aaKnown RBP18.82■□□□□ 0.6
C9orf3-211ENST00000463372 USP50Q70EL3 339 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-211ENST00000463372 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
C9orf3-211ENST00000463372 CCDC24Q8N4L8 307 aa18.81■□□□□ 0.6
C9orf3-211ENST00000463372 ZIC5Q96T25 663 aa18.81■□□□□ 0.6
C9orf3-211ENST00000463372 ANKRD26Q9UPS8 1709 aa18.8■□□□□ 0.6
C9orf3-211ENST00000463372 FYB1O15117 783 aa18.8■□□□□ 0.6
C9orf3-211ENST00000463372 NPHP1O15259 732 aa18.8■□□□□ 0.6
C9orf3-211ENST00000463372 MASTLQ96GX5 879 aa18.8■□□□□ 0.6
C9orf3-211ENST00000463372 PUS7Q96PZ0 661 aaKnown RBP18.8■□□□□ 0.6
C9orf3-211ENST00000463372 EYA1Q99502 592 aa18.8■□□□□ 0.6
C9orf3-211ENST00000463372 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 SZT2Q5T011 3432 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 TRPA1O75762 1119 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 EPS15P42566 896 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 PKN2Q16513 984 aaKnown RBP18.79■□□□□ 0.6
C9orf3-211ENST00000463372 PRR5LQ6MZQ0 368 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
C9orf3-211ENST00000463372 SRGNP10124 158 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 IARSP41252 1262 aaKnown RBP18.78■□□□□ 0.6
C9orf3-211ENST00000463372 EIF6P56537 245 aaKnown RBP18.78■□□□□ 0.6
C9orf3-211ENST00000463372 DNAJC10Q8IXB1 793 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 ZNF408Q9H9D4 720 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 KIF20BQ96Q89 1820 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 SCN11AQ9UI33 1791 aa18.78■□□□□ 0.6
C9orf3-211ENST00000463372 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-211ENST00000463372 RTKN2Q8IZC4 609 aa18.77■□□□□ 0.6
C9orf3-211ENST00000463372 NFATC2IPQ8NCF5 419 aa18.76■□□□□ 0.59
C9orf3-211ENST00000463372 C7orf43Q8WVR3 580 aa18.76■□□□□ 0.59
C9orf3-211ENST00000463372 RNF186Q9NXI6 227 aa18.76■□□□□ 0.59
C9orf3-211ENST00000463372 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
C9orf3-211ENST00000463372 SCNN1DP51172 638 aa18.75■□□□□ 0.59
C9orf3-211ENST00000463372 CYP19A1P11511 503 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-211ENST00000463372 ST5P78524 1137 aa18.74■□□□□ 0.59
C9orf3-211ENST00000463372 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
C9orf3-211ENST00000463372 CNBD1Q8NA66 436 aa18.74■□□□□ 0.59
C9orf3-211ENST00000463372 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
C9orf3-211ENST00000463372 CEP290O15078 2479 aa18.74■□□□□ 0.59
C9orf3-211ENST00000463372 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
C9orf3-211ENST00000463372 MTHFSP49914 203 aa18.73■□□□□ 0.59
C9orf3-211ENST00000463372 HUNKP57058 714 aa18.73■□□□□ 0.59
C9orf3-211ENST00000463372 SYNE4Q8N205 404 aa18.73■□□□□ 0.59
C9orf3-211ENST00000463372 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-211ENST00000463372 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
C9orf3-211ENST00000463372 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
C9orf3-211ENST00000463372 KIF23Q02241 960 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-211ENST00000463372 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-211ENST00000463372 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-211ENST00000463372 COLQQ9Y215 455 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-211ENST00000463372 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
C9orf3-211ENST00000463372 A0A087WZG4 1122 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 RGMBQ6NW40 437 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 CCDC102AQ96A19 550 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 COL6A3P12111 3177 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
C9orf3-211ENST00000463372 FAM155AB1AL88 458 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-211ENST00000463372 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
C9orf3-211ENST00000463372 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
C9orf3-211ENST00000463372 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
C9orf3-211ENST00000463372 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
C9orf3-211ENST00000463372 NPR1P16066 1061 aa18.67■□□□□ 0.58
C9orf3-211ENST00000463372 SETDB2Q96T68 719 aa18.67■□□□□ 0.58
C9orf3-211ENST00000463372 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
C9orf3-211ENST00000463372 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
C9orf3-211ENST00000463372 PITPNM2Q9BZ72 1349 aa18.66■□□□□ 0.58
C9orf3-211ENST00000463372 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
C9orf3-211ENST00000463372 FBXO46Q6PJ61 603 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-211ENST00000463372 ZNF157P51786 506 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-211ENST00000463372 PSMD1Q99460 953 aa18.64■□□□□ 0.57
C9orf3-211ENST00000463372 GPRC5DQ9NZD1 345 aa18.64■□□□□ 0.57
C9orf3-211ENST00000463372 MNX1P50219 401 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-211ENST00000463372 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
C9orf3-211ENST00000463372 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
C9orf3-211ENST00000463372 ZC3H15Q8WU90 426 aaKnown RBP18.62■□□□□ 0.57
C9orf3-211ENST00000463372 CSRNP1Q96S65 589 aa18.62■□□□□ 0.57
C9orf3-211ENST00000463372 PGAP2Q9UHJ9 254 aa18.62■□□□□ 0.57
C9orf3-211ENST00000463372 COL4A5P29400 1685 aa18.62■□□□□ 0.57
C9orf3-211ENST00000463372 POLR2AP24928 1970 aaKnown RBP18.61■□□□□ 0.57
C9orf3-211ENST00000463372 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
C9orf3-211ENST00000463372 RBBP6Q7Z6E9 1792 aaKnown RBP18.6■□□□□ 0.57
C9orf3-211ENST00000463372 PAPPA2Q9BXP8 1791 aa18.6■□□□□ 0.57
C9orf3-211ENST00000463372 ALDH1B1P30837 517 aa18.6■□□□□ 0.57
C9orf3-211ENST00000463372 C2orf69Q8N8R5 385 aa18.6■□□□□ 0.57
C9orf3-211ENST00000463372 ZNF296Q8WUU4 475 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-211ENST00000463372 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
C9orf3-211ENST00000463372 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-211ENST00000463372 STARD3NLO95772 234 aa18.58■□□□□ 0.56
C9orf3-211ENST00000463372 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
C9orf3-211ENST00000463372 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
C9orf3-211ENST00000463372 NIM1KQ8IY84 436 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms