RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 GYS1P13807 737 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 NEXNQ0ZGT2 675 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 MSL1Q68DK7 614 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 NBPF10Q6P3W6 841 aaKnown RBP8.15□□□□□ -1.1
SF3B1-206ENST00000462613 ANKRD13DQ6ZTN6 518 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 COPS6Q7L5N1 327 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 RIC3Q7Z5B4 369 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 NBPF15Q8N660 670 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 XAGE3Q8WTP9 111 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 SETDB2Q96T68 719 aa8.15□□□□□ -1.1
SF3B1-206ENST00000462613 PDGFDQ9GZP0 370 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-206ENST00000462613 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.1
SF3B1-206ENST00000462613 SRP68Q9UHB9 627 aaKnown RBP8.15□□□□□ -1.1
SF3B1-206ENST00000462613 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 MYH3P11055 1940 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 CAMTA2O94983 1202 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 ANXA1P04083 346 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 MMP10P09238 476 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-206ENST00000462613 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-206ENST00000462613 ALDH1L2Q3SY69 923 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 SMIM5Q71RC9 77 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 AMIGO3Q86WK7 504 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 PLBD2Q8NHP8 589 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
SF3B1-206ENST00000462613 DCAF8L1A6NGE4 600 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 ST5P78524 1137 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 FKBP8Q14318 412 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 PDIA6Q15084 440 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 PROSER3Q2NL68 480 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
SF3B1-206ENST00000462613 TTLL7Q6ZT98 887 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 PPP1R42Q7Z4L9 355 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
SF3B1-206ENST00000462613 SMC4Q9NTJ3 1288 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 NIP7Q9Y221 180 aaKnown RBP eCLIP8.13□□□□□ -1.11
SF3B1-206ENST00000462613 CACNA1SQ13698 1873 aa8.13□□□□□ -1.11
SF3B1-206ENST00000462613 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 PTPRCP08575 1304 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 KIF16BQ96L93 1317 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 TCERG1O14776 1098 aaKnown RBP8.12□□□□□ -1.11
SF3B1-206ENST00000462613 HSP90B1P14625 803 aaKnown RBP8.12□□□□□ -1.11
SF3B1-206ENST00000462613 FLIIQ13045 1269 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 NFIXQ14938 502 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 PARP10Q53GL7 1025 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 KSR2Q6VAB6 950 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 NBPF5PQ86XG9 351 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-206ENST00000462613 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
SF3B1-206ENST00000462613 N4BP2Q86UW6 1770 aaPredicted RBP8.12□□□□□ -1.11
SF3B1-206ENST00000462613 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 IPO8O15397 1037 aaKnown RBP8.11□□□□□ -1.11
SF3B1-206ENST00000462613 SERPINB2P05120 415 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 PTGER2P43116 358 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 TCIRG1Q13488 830 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 TBC1D9BQ66K14 1250 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
SF3B1-206ENST00000462613 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 CD2APQ9Y5K6 639 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 LAMB2P55268 1798 aa8.11□□□□□ -1.11
SF3B1-206ENST00000462613 IBTKQ9P2D0 1353 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-206ENST00000462613 PI4KAP2A4QPH2 592 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 POLRMTO00411 1230 aaKnown RBP8.1□□□□□ -1.11
SF3B1-206ENST00000462613 GPTP24298 496 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 TM4SF1P30408 202 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 HLFQ16534 295 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 LRP10Q7Z4F1 713 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 PI4KAP1Q8N8J0 262 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 DNAAF4Q8WXU2 420 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 MYD88Q99836 296 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 SGIP1Q9BQI5 828 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 MAP3K2Q9Y2U5 619 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 ANKRD31Q8N7Z5 1873 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 DLEC1Q9Y238 1755 aa8.1□□□□□ -1.11
SF3B1-206ENST00000462613 FAM177BA6PVY3 158 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 MS4A1P11836 297 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 PDE6BP35913 854 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 SLC4A10Q6U841 1118 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 ZNF34Q8IZ26 560 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 CCDC191Q8NCU4 936 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 SSH1Q8WYL5 1049 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 BCL2L13Q9BXK5 485 aa8.09□□□□□ -1.11
SF3B1-206ENST00000462613 API5Q9BZZ5 524 aaKnown RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 FHDC1Q9C0D6 1143 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 CWC25Q9NXE8 425 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 TRMT112Q9UI30 125 aaKnown RBP8.09□□□□□ -1.11
SF3B1-206ENST00000462613 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
SF3B1-206ENST00000462613 SH3TC1Q8TE82 1336 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 PXDNLA1KZ92 1463 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 H0YIN7 160 aa8.08□□□□□ -1.12
SF3B1-206ENST00000462613 RARSP54136 660 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms