RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RAB11FIP3O75154 756 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 MTMR6Q9Y217 621 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 TAF7Q15545 349 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 PRPF40BQ6NWY9 871 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 KIF1BPQ96EK5 621 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 PYCARDQ9ULZ3 195 aa14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-203ENST00000462146 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 NECAB1Q8N987 351 aa14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 CHMP3Q9Y3E7 222 aa14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
PDZRN3-203ENST00000462146 TTC21AQ8NDW8 1320 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 EPB41L2O43491 1005 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 HOXC9P31274 260 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 FAM173BQ6P4H8 233 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 CHPF2Q9P2E5 772 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 TNRQ92752 1358 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 KCNQ3O43525 872 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 NLRP6P59044 892 aa14.06□□□□□ -0.16
PDZRN3-203ENST00000462146 PI4KAP2A4QPH2 592 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 HDGFP51858 240 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 ME3Q16798 604 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 PI4KAP1Q8N8J0 262 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 PDRG1Q9NUG6 133 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 FER1L4A9Z1Z3 1794 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 MTERF4Q7Z6M4 381 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 SPTLC3Q9NUV7 552 aa14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 PA2G4Q9UQ80 394 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-203ENST00000462146 OS9Q13438 667 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 BEND3Q5T5X7 828 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 FERMT3Q86UX7 667 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 PRIMPOLQ96LW4 560 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 CAMK4Q16566 473 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 TCEANC2Q96MN5 208 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
PDZRN3-203ENST00000462146 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 ADAMTSL3P82987 1691 aa14.03□□□□□ -0.16
PDZRN3-203ENST00000462146 LIG1P18858 919 aa14.02□□□□□ -0.16
PDZRN3-203ENST00000462146 GTF2F1P35269 517 aaKnown RBP eCLIP14.02□□□□□ -0.16
PDZRN3-203ENST00000462146 KIAA1524Q8TCG1 905 aa14.02□□□□□ -0.16
PDZRN3-203ENST00000462146 BCL2L12Q9HB09 334 aa14.02□□□□□ -0.16
PDZRN3-203ENST00000462146 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.16
PDZRN3-203ENST00000462146 VPS53Q5VIR6 699 aa14.02□□□□□ -0.17
PDZRN3-203ENST00000462146 FAM227BQ96M60 508 aa14.02□□□□□ -0.17
PDZRN3-203ENST00000462146 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
PDZRN3-203ENST00000462146 ADCY9O60503 1353 aa14.02□□□□□ -0.17
PDZRN3-203ENST00000462146 GLRX3O76003 335 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 RGPD2P0DJD1 1756 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 KIF3AQ9Y496 699 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 USP42Q9H9J4 1324 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 LTN1O94822 1766 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 CBX1P83916 185 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 LUZP1Q86V48 1076 aa14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 RBM8AQ9Y5S9 174 aaKnown RBP14.01□□□□□ -0.17
PDZRN3-203ENST00000462146 PLEKHG1Q9ULL1 1385 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
PDZRN3-203ENST00000462146 PTGS1P23219 599 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 NECTIN1Q15223 517 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 ATP2B3Q16720 1220 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 CCDC171Q6TFL3 1326 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 MRVI1Q9Y6F6 885 aa14□□□□□ -0.17
PDZRN3-203ENST00000462146 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 CREB3L3Q68CJ9 461 aa13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 CLASRPQ8N2M8 674 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 ZHX1Q9UKY1 873 aaPredicted RBP13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 CCDC192P0DO97 292 aa13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 CWF19L2Q2TBE0 894 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 ECHDC1Q9NTX5 307 aa13.99□□□□□ -0.17
PDZRN3-203ENST00000462146 NMIQ13287 307 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 PROSER3Q2NL68 480 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 RUFY2Q8WXA3 655 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 SH2B1Q9NRF2 756 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms