RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 ANKRD31Q8N7Z5 1873 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 FSTL1Q12841 308 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
HDLBP-230ENST00000462130 LMNB1P20700 586 aa13.48□□□□□ -0.25
HDLBP-230ENST00000462130 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
HDLBP-230ENST00000462130 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
HDLBP-230ENST00000462130 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
HDLBP-230ENST00000462130 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 NPHP1O15259 732 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-230ENST00000462130 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 DNAJC5GQ8N7S2 189 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.255e-8■□□□□ 8.1
HDLBP-230ENST00000462130 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
HDLBP-230ENST00000462130 A1BGP04217 495 aa13.46□□□□□ -0.25
HDLBP-230ENST00000462130 PDE6BP35913 854 aa13.46□□□□□ -0.25
HDLBP-230ENST00000462130 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.25
HDLBP-230ENST00000462130 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 HTRA3P83110 453 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 SMC1BQ8NDV3 1235 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
HDLBP-230ENST00000462130 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-230ENST00000462130 GLTPD2A6NH11 291 aa13.44□□□□□ -0.26
HDLBP-230ENST00000462130 VEGFAP15692 232 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-230ENST00000462130 RTF1Q92541 710 aaKnown RBP13.44□□□□□ -0.26
HDLBP-230ENST00000462130 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
HDLBP-230ENST00000462130 CEMIPQ8WUJ3 1361 aa13.44□□□□□ -0.26
HDLBP-230ENST00000462130 NFKBIEO00221 500 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 KCNQ3O43525 872 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 C21orf2O43822 256 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-230ENST00000462130 PRELPP51888 382 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 ST5P78524 1137 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDLBP-230ENST00000462130 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
HDLBP-230ENST00000462130 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
HDLBP-230ENST00000462130 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
HDLBP-230ENST00000462130 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
HDLBP-230ENST00000462130 USP16Q9Y5T5 823 aa13.42□□□□□ -0.26
HDLBP-230ENST00000462130 ARFGEF2Q9Y6D5 1785 aa13.42□□□□□ -0.26
HDLBP-230ENST00000462130 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-230ENST00000462130 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
HDLBP-230ENST00000462130 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
HDLBP-230ENST00000462130 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
HDLBP-230ENST00000462130 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
HDLBP-230ENST00000462130 MCM10Q7L590 875 aa13.4□□□□□ -0.26
HDLBP-230ENST00000462130 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
HDLBP-230ENST00000462130 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
HDLBP-230ENST00000462130 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
HDLBP-230ENST00000462130 STYK1Q6J9G0 422 aa13.39□□□□□ -0.27
HDLBP-230ENST00000462130 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-230ENST00000462130 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
HDLBP-230ENST00000462130 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
HDLBP-230ENST00000462130 NEFMP07197 916 aa13.38□□□□□ -0.27
HDLBP-230ENST00000462130 SRGNP10124 158 aa13.38□□□□□ -0.27
HDLBP-230ENST00000462130 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
HDLBP-230ENST00000462130 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
HDLBP-230ENST00000462130 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
HDLBP-230ENST00000462130 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
HDLBP-230ENST00000462130 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
HDLBP-230ENST00000462130 JMYQ8N9B5 988 aa13.37□□□□□ -0.27
HDLBP-230ENST00000462130 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
HDLBP-230ENST00000462130 LTBP3Q9NS15 1303 aa13.37□□□□□ -0.27
HDLBP-230ENST00000462130 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
HDLBP-230ENST00000462130 TAF7Q15545 349 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-230ENST00000462130 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
HDLBP-230ENST00000462130 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDLBP-230ENST00000462130 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-230ENST00000462130 NUP98P52948 1817 aa13.35□□□□□ -0.27
HDLBP-230ENST00000462130 POTECB2RU33 542 aa13.35□□□□□ -0.27
HDLBP-230ENST00000462130 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-230ENST00000462130 PCNTO95613 3336 aa13.35□□□□□ -0.27
HDLBP-230ENST00000462130 SCN4AP35499 1836 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 DDNO94850 711 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-230ENST00000462130 NPR1P16066 1061 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
HDLBP-230ENST00000462130 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
HDLBP-230ENST00000462130 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
HDLBP-230ENST00000462130 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
HDLBP-230ENST00000462130 RALBP1Q15311 655 aa13.33□□□□□ -0.28
HDLBP-230ENST00000462130 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
HDLBP-230ENST00000462130 RGL2O15211 777 aa13.32□□□□□ -0.28
HDLBP-230ENST00000462130 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
HDLBP-230ENST00000462130 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
HDLBP-230ENST00000462130 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms