RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
PABPC4-208ENST00000461578 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
PABPC4-208ENST00000461578 AIDAQ96BJ3 306 aa18.59■□□□□ 0.57
PABPC4-208ENST00000461578 TAF1DQ9H5J8 278 aaPredicted RBP18.59■□□□□ 0.57
PABPC4-208ENST00000461578 ARFGEF2Q9Y6D5 1785 aa18.59■□□□□ 0.57
PABPC4-208ENST00000461578 PIP4K2AP48426 406 aaPredicted RBP18.58■□□□□ 0.56
PABPC4-208ENST00000461578 VEGFBP49765 207 aa18.58■□□□□ 0.56
PABPC4-208ENST00000461578 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
PABPC4-208ENST00000461578 SOGA3Q5TF21 947 aa18.58■□□□□ 0.56
PABPC4-208ENST00000461578 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.56
PABPC4-208ENST00000461578 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.56
PABPC4-208ENST00000461578 BCORQ6W2J9 1755 aa18.58■□□□□ 0.56
PABPC4-208ENST00000461578 GNAT3A8MTJ3 354 aa18.57■□□□□ 0.56
PABPC4-208ENST00000461578 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
PABPC4-208ENST00000461578 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
PABPC4-208ENST00000461578 FMNL2Q96PY5 1086 aa18.57■□□□□ 0.56
PABPC4-208ENST00000461578 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
PABPC4-208ENST00000461578 CLEC11AQ9Y240 323 aa18.57■□□□□ 0.56
PABPC4-208ENST00000461578 SCN4AP35499 1836 aa18.57■□□□□ 0.56
PABPC4-208ENST00000461578 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
PABPC4-208ENST00000461578 TMEM88BA6NKF7 163 aa18.56■□□□□ 0.56
PABPC4-208ENST00000461578 KCNQ3O43525 872 aa18.56■□□□□ 0.56
PABPC4-208ENST00000461578 CTCFP49711 727 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-208ENST00000461578 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
PABPC4-208ENST00000461578 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-208ENST00000461578 L3MBTL3Q96JM7 780 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-208ENST00000461578 ZNF277Q9NRM2 450 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-208ENST00000461578 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
PABPC4-208ENST00000461578 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
PABPC4-208ENST00000461578 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
PABPC4-208ENST00000461578 ITGBL1O95965 494 aaPredicted RBP18.54■□□□□ 0.56
PABPC4-208ENST00000461578 LBX1P52954 281 aa18.54■□□□□ 0.56
PABPC4-208ENST00000461578 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
PABPC4-208ENST00000461578 C7orf43Q8WVR3 580 aa18.53■□□□□ 0.56
PABPC4-208ENST00000461578 HACL1Q9UJ83 578 aa18.53■□□□□ 0.56
PABPC4-208ENST00000461578 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
PABPC4-208ENST00000461578 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
PABPC4-208ENST00000461578 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
PABPC4-208ENST00000461578 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
PABPC4-208ENST00000461578 NPR1P16066 1061 aa18.52■□□□□ 0.56
PABPC4-208ENST00000461578 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
PABPC4-208ENST00000461578 KIF7Q2M1P5 1343 aa18.51■□□□□ 0.55
PABPC4-208ENST00000461578 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
PABPC4-208ENST00000461578 EPHX2P34913 555 aa18.51■□□□□ 0.55
PABPC4-208ENST00000461578 MAP1SQ66K74 1059 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-208ENST00000461578 WBP1LQ9NX94 342 aa18.51■□□□□ 0.55
PABPC4-208ENST00000461578 ADAMTSL1Q8N6G6 1762 aa18.5■□□□□ 0.55
PABPC4-208ENST00000461578 DEFB115Q30KQ5 88 aa18.49■□□□□ 0.55
PABPC4-208ENST00000461578 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
PABPC4-208ENST00000461578 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
PABPC4-208ENST00000461578 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
PABPC4-208ENST00000461578 CEMIPQ8WUJ3 1361 aa18.49■□□□□ 0.55
PABPC4-208ENST00000461578 PER1O15534 1290 aaPredicted RBP18.48■□□□□ 0.55
PABPC4-208ENST00000461578 HSPA8P11142 646 aaKnown RBP18.48■□□□□ 0.55
PABPC4-208ENST00000461578 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
PABPC4-208ENST00000461578 ABT1Q9ULW3 272 aaKnown RBP18.48■□□□□ 0.55
PABPC4-208ENST00000461578 RASSF10A6NK89 507 aa18.47■□□□□ 0.55
PABPC4-208ENST00000461578 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
PABPC4-208ENST00000461578 TPTE2Q6XPS3 522 aa18.47■□□□□ 0.55
PABPC4-208ENST00000461578 PNMA8AQ86V59 439 aaPredicted RBP18.47■□□□□ 0.55
PABPC4-208ENST00000461578 RTKN2Q8IZC4 609 aa18.47■□□□□ 0.55
PABPC4-208ENST00000461578 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
PABPC4-208ENST00000461578 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
PABPC4-208ENST00000461578 WDR33Q9C0J8 1336 aaKnown RBP18.47■□□□□ 0.55
PABPC4-208ENST00000461578 KLRG2A4D1S0 409 aaPredicted RBP18.46■□□□□ 0.55
PABPC4-208ENST00000461578 PRKAR2BP31323 418 aa18.46■□□□□ 0.55
PABPC4-208ENST00000461578 ABHD8Q96I13 439 aa18.46■□□□□ 0.55
PABPC4-208ENST00000461578 FZD9O00144 591 aa18.45■□□□□ 0.54
PABPC4-208ENST00000461578 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
PABPC4-208ENST00000461578 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
PABPC4-208ENST00000461578 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
PABPC4-208ENST00000461578 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-208ENST00000461578 FMR1Q06787 632 aaKnown RBP eCLIP18.44■□□□□ 0.546e-7■□□□□ 10.3
PABPC4-208ENST00000461578 GRM1Q13255 1194 aa18.44■□□□□ 0.54
PABPC4-208ENST00000461578 PAXIP1Q6ZW49 1069 aaPredicted RBP18.44■□□□□ 0.54
PABPC4-208ENST00000461578 GPC2Q8N158 579 aa18.44■□□□□ 0.54
PABPC4-208ENST00000461578 NBPF26B4DH59 902 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
PABPC4-208ENST00000461578 HLFQ16534 295 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 NBPF10Q6P3W6 841 aaKnown RBP18.43■□□□□ 0.54
PABPC4-208ENST00000461578 MCM10Q7L590 875 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 NBPF15Q8N660 670 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 JDP2Q8WYK2 163 aa18.43■□□□□ 0.54
PABPC4-208ENST00000461578 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
PABPC4-208ENST00000461578 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
PABPC4-208ENST00000461578 COL4A5P29400 1685 aa18.41■□□□□ 0.54
PABPC4-208ENST00000461578 LTBP1Q14766 1721 aa18.41■□□□□ 0.54
PABPC4-208ENST00000461578 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
PABPC4-208ENST00000461578 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
PABPC4-208ENST00000461578 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
PABPC4-208ENST00000461578 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
PABPC4-208ENST00000461578 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
PABPC4-208ENST00000461578 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
PABPC4-208ENST00000461578 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
PABPC4-208ENST00000461578 PSMD1Q99460 953 aa18.4■□□□□ 0.54
PABPC4-208ENST00000461578 EPS15P42566 896 aa18.39■□□□□ 0.53
PABPC4-208ENST00000461578 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
PABPC4-208ENST00000461578 SLC51AQ86UW1 340 aa18.39■□□□□ 0.53
PABPC4-208ENST00000461578 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms