RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 KRT24Q2M2I5 525 aa29.29■■■□□ 2.28
TRAF4-207ENST00000461195 KIF6Q6ZMV9 814 aa29.29■■■□□ 2.28
TRAF4-207ENST00000461195 MBIPQ9NS73 344 aa29.29■■■□□ 2.28
TRAF4-207ENST00000461195 GNAI1P63096 354 aa29.28■■■□□ 2.28
TRAF4-207ENST00000461195 PRR5LQ6MZQ0 368 aa29.28■■■□□ 2.28
TRAF4-207ENST00000461195 ATP10DQ9P241 1426 aa29.28■■■□□ 2.28
TRAF4-207ENST00000461195 MAP3K15Q6ZN16 1313 aa29.27■■■□□ 2.28
TRAF4-207ENST00000461195 ERVV-1B6SEH8 477 aa29.27■■■□□ 2.28
TRAF4-207ENST00000461195 HLFQ16534 295 aa29.27■■■□□ 2.28
TRAF4-207ENST00000461195 NUP98P52948 1817 aa29.27■■■□□ 2.28
TRAF4-207ENST00000461195 CEP350Q5VT06 3117 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 ANKRD31Q8N7Z5 1873 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 NPHP1O15259 732 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 HOXB7P09629 217 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 PDIA6Q15084 440 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 TTLL7Q6ZT98 887 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 CNBD1Q8NA66 436 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 NIP7Q9Y221 180 aaKnown RBP eCLIP29.26■■■□□ 2.27
TRAF4-207ENST00000461195 ARFGEF1Q9Y6D6 1849 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 DLEC1Q9Y238 1755 aa29.26■■■□□ 2.27
TRAF4-207ENST00000461195 CCDC27Q2M243 656 aa29.25■■■□□ 2.27
TRAF4-207ENST00000461195 NECTIN2Q92692 538 aa29.25■■■□□ 2.27
TRAF4-207ENST00000461195 BRIP1Q9BX63 1249 aa29.25■■■□□ 2.27
TRAF4-207ENST00000461195 DALRD3Q5D0E6 543 aaKnown RBP29.24■■■□□ 2.27
TRAF4-207ENST00000461195 LRP10Q7Z4F1 713 aa29.24■■■□□ 2.27
TRAF4-207ENST00000461195 NBPF5PQ86XG9 351 aaPredicted RBP29.24■■■□□ 2.27
TRAF4-207ENST00000461195 ST5P78524 1137 aa29.23■■■□□ 2.27
TRAF4-207ENST00000461195 PROSER3Q2NL68 480 aa29.23■■■□□ 2.27
TRAF4-207ENST00000461195 NCBP3Q53F19 620 aaKnown RBP29.23■■■□□ 2.27
TRAF4-207ENST00000461195 C2CD5Q86YS7 1000 aa29.23■■■□□ 2.27
TRAF4-207ENST00000461195 H0YIN7 160 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 ANXA1P04083 346 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 PDE6BP35913 854 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 CCDC24Q8N4L8 307 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 ZBTB3Q9H5J0 574 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 PDZRN3Q9UPQ7 1066 aa29.22■■■□□ 2.27
TRAF4-207ENST00000461195 HDGFL1Q5TGJ6 251 aa29.21■■■□□ 2.27
TRAF4-207ENST00000461195 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
TRAF4-207ENST00000461195 WWC1Q8IX03 1113 aa29.21■■■□□ 2.27
TRAF4-207ENST00000461195 DDX21Q9NR30 783 aaKnown RBP eCLIP29.21■■■□□ 2.27
TRAF4-207ENST00000461195 TPTE2Q6XPS3 522 aa29.2■■■□□ 2.26
TRAF4-207ENST00000461195 FAM9BQ8IZU0 186 aa29.2■■■□□ 2.26
TRAF4-207ENST00000461195 GPBP1L1Q9HC44 474 aaPredicted RBP29.2■■■□□ 2.26
TRAF4-207ENST00000461195 ZNF526Q8TF50 670 aaPredicted RBP29.19■■■□□ 2.26
TRAF4-207ENST00000461195 ARHGAP27Q6ZUM4 889 aa29.18■■■□□ 2.26
TRAF4-207ENST00000461195 CHPF2Q9P2E5 772 aa29.18■■■□□ 2.26
TRAF4-207ENST00000461195 GIGYF2Q6Y7W6 1299 aaKnown RBP29.17■■■□□ 2.26
TRAF4-207ENST00000461195 COL11A2P13942 1736 aaPredicted RBP29.17■■■□□ 2.26
TRAF4-207ENST00000461195 ADCY9O60503 1353 aa29.16■■■□□ 2.26
TRAF4-207ENST00000461195 FAM177BA6PVY3 158 aa29.16■■■□□ 2.26
TRAF4-207ENST00000461195 COPS6Q7L5N1 327 aa29.16■■■□□ 2.26
TRAF4-207ENST00000461195 TTLL6Q8N841 843 aa29.16■■■□□ 2.26
TRAF4-207ENST00000461195 XAGE3Q8WTP9 111 aa29.16■■■□□ 2.26
TRAF4-207ENST00000461195 AIMP1Q12904 312 aaKnown RBP29.15■■■□□ 2.26
TRAF4-207ENST00000461195 NYXQ9GZU5 481 aa29.15■■■□□ 2.26
TRAF4-207ENST00000461195 DBF4Q9UBU7 674 aaPredicted RBP29.15■■■□□ 2.26
TRAF4-207ENST00000461195 ZNF622Q969S3 477 aaKnown RBP eCLIP29.14■■■□□ 2.26
TRAF4-207ENST00000461195 IL16Q14005 1332 aa29.14■■■□□ 2.25
TRAF4-207ENST00000461195 GPTP24298 496 aa29.13■■■□□ 2.25
TRAF4-207ENST00000461195 GTF2E1P29083 439 aaPredicted RBP29.13■■■□□ 2.25
TRAF4-207ENST00000461195 ZNF34Q8IZ26 560 aa29.13■■■□□ 2.25
TRAF4-207ENST00000461195 ELL2O00472 640 aaPredicted RBP29.12■■■□□ 2.25
TRAF4-207ENST00000461195 C8orf58Q8NAV2 365 aa29.12■■■□□ 2.25
TRAF4-207ENST00000461195 SALL2Q9Y467 1007 aaPredicted RBP29.12■■■□□ 2.25
TRAF4-207ENST00000461195 UBN2Q6ZU65 1347 aa29.12■■■□□ 2.25
TRAF4-207ENST00000461195 TSR2Q969E8 191 aaKnown RBP29.11■■■□□ 2.25
TRAF4-207ENST00000461195 HYPKQ9NX55 129 aa29.11■■■□□ 2.25
TRAF4-207ENST00000461195 IBTKQ9P2D0 1353 aaPredicted RBP29.11■■■□□ 2.25
TRAF4-207ENST00000461195 SRGNP10124 158 aa29.1■■■□□ 2.25
TRAF4-207ENST00000461195 STYK1Q6J9G0 422 aa29.1■■■□□ 2.25
TRAF4-207ENST00000461195 ANKRD36CQ5JPF3 1778 aa29.1■■■□□ 2.25
TRAF4-207ENST00000461195 PARP10Q53GL7 1025 aa29.09■■■□□ 2.25
TRAF4-207ENST00000461195 HSP90AB3PQ58FF7 597 aa29.09■■■□□ 2.25
TRAF4-207ENST00000461195 MASTLQ96GX5 879 aa29.09■■■□□ 2.25
TRAF4-207ENST00000461195 CHMP4AQ9BY43 222 aa29.09■■■□□ 2.25
TRAF4-207ENST00000461195 SUSD4Q5VX71 490 aa29.08■■■□□ 2.25
TRAF4-207ENST00000461195 WDR63Q8IWG1 891 aa29.08■■■□□ 2.25
TRAF4-207ENST00000461195 CNKSR1Q969H4 720 aa29.08■■■□□ 2.25
TRAF4-207ENST00000461195 KLRG2A4D1S0 409 aaPredicted RBP29.07■■■□□ 2.24
TRAF4-207ENST00000461195 PPP1R42Q7Z4L9 355 aa29.07■■■□□ 2.24
TRAF4-207ENST00000461195 NUTM1Q86Y26 1132 aa29.07■■■□□ 2.24
TRAF4-207ENST00000461195 CACNA1SQ13698 1873 aa29.06■■■□□ 2.24
TRAF4-207ENST00000461195 ARFGEF2Q9Y6D5 1785 aa29.06■■■□□ 2.24
TRAF4-207ENST00000461195 ABCC12Q96J65 1359 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 ERFEQ4G0M1 354 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 CCDC30Q5VVM6 783 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 ANKRD13DQ6ZTN6 518 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 TSPYL6Q8N831 410 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 PLBD2Q8NHP8 589 aa29.05■■■□□ 2.24
TRAF4-207ENST00000461195 NTSR2O95665 410 aa29.04■■■□□ 2.24
TRAF4-207ENST00000461195 NPR1P16066 1061 aa29.04■■■□□ 2.24
TRAF4-207ENST00000461195 TCIRG1Q13488 830 aa29.04■■■□□ 2.24
TRAF4-207ENST00000461195 TNRC6CQ9HCJ0 1690 aaKnown RBP29.04■■■□□ 2.24
TRAF4-207ENST00000461195 HSPA6P17066 643 aa29.03■■■□□ 2.24
TRAF4-207ENST00000461195 SLX4Q8IY92 1834 aa29.03■■■□□ 2.24
TRAF4-207ENST00000461195 RIC1Q4ADV7 1423 aa29.03■■■□□ 2.24
TRAF4-207ENST00000461195 SBF1O95248 1867 aa29.02■■■□□ 2.24
TRAF4-207ENST00000461195 UTP14AQ9BVJ6 771 aaKnown RBP29.02■■■□□ 2.24
TRAF4-207ENST00000461195 FANCIQ9NVI1 1328 aa29.01■■■□□ 2.23
TRAF4-207ENST00000461195 C9orf131Q5VYM1 1079 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms