RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
HCFC1-204ENST00000461098 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
HCFC1-204ENST00000461098 IQCA1LA6NCM1 817 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 SLC34A2O95436 690 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 A1BGP04217 495 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
HCFC1-204ENST00000461098 LBX1P52954 281 aa16.11■□□□□ 0.17
HCFC1-204ENST00000461098 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
HCFC1-204ENST00000461098 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-204ENST00000461098 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-204ENST00000461098 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
HCFC1-204ENST00000461098 RASSF10A6NK89 507 aa16.09■□□□□ 0.17
HCFC1-204ENST00000461098 KCNQ3O43525 872 aa16.09■□□□□ 0.17
HCFC1-204ENST00000461098 ST5P78524 1137 aa16.09■□□□□ 0.17
HCFC1-204ENST00000461098 OLFM4Q6UX06 510 aa16.09■□□□□ 0.17
HCFC1-204ENST00000461098 DIAPH1O60610 1272 aaKnown RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 AIDAQ96BJ3 306 aa16.08■□□□□ 0.16
HCFC1-204ENST00000461098 ZNF277Q9NRM2 450 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-204ENST00000461098 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 EPHX2P34913 555 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 HACL1Q9UJ83 578 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 CEMIPQ8WUJ3 1361 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
HCFC1-204ENST00000461098 FZD9O00144 591 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
HCFC1-204ENST00000461098 PIP4K2AP48426 406 aaPredicted RBP16.06■□□□□ 0.16
HCFC1-204ENST00000461098 TEFQ10587 303 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 CNTROBQ8N137 903 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 ABHD8Q96I13 439 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
HCFC1-204ENST00000461098 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
HCFC1-204ENST00000461098 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
HCFC1-204ENST00000461098 NPHP1O15259 732 aa16.05■□□□□ 0.16
HCFC1-204ENST00000461098 NPR1P16066 1061 aa16.05■□□□□ 0.16
HCFC1-204ENST00000461098 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-204ENST00000461098 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
HCFC1-204ENST00000461098 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
HCFC1-204ENST00000461098 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
HCFC1-204ENST00000461098 NBPF5PQ86XG9 351 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-204ENST00000461098 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
HCFC1-204ENST00000461098 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
HCFC1-204ENST00000461098 COL4A5P29400 1685 aa16.04■□□□□ 0.16
HCFC1-204ENST00000461098 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
HCFC1-204ENST00000461098 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
HCFC1-204ENST00000461098 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
HCFC1-204ENST00000461098 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
HCFC1-204ENST00000461098 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
HCFC1-204ENST00000461098 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.169e-8■□□□□ 11.3
HCFC1-204ENST00000461098 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
HCFC1-204ENST00000461098 RTKN2Q8IZC4 609 aa16.02■□□□□ 0.16
HCFC1-204ENST00000461098 GPC2Q8N158 579 aa16.02■□□□□ 0.16
HCFC1-204ENST00000461098 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
HCFC1-204ENST00000461098 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
HCFC1-204ENST00000461098 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
HCFC1-204ENST00000461098 MAP2K1Q02750 393 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-204ENST00000461098 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
HCFC1-204ENST00000461098 NBPF15Q8N660 670 aa16.01■□□□□ 0.15
HCFC1-204ENST00000461098 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
HCFC1-204ENST00000461098 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
HCFC1-204ENST00000461098 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
HCFC1-204ENST00000461098 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
HCFC1-204ENST00000461098 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
HCFC1-204ENST00000461098 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
HCFC1-204ENST00000461098 RGL2O15211 777 aa15.99■□□□□ 0.15
HCFC1-204ENST00000461098 RGS19P49795 217 aa15.99■□□□□ 0.15
HCFC1-204ENST00000461098 PSMD1Q99460 953 aa15.99■□□□□ 0.15
HCFC1-204ENST00000461098 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
HCFC1-204ENST00000461098 NIP7Q9Y221 180 aaKnown RBP eCLIP15.99■□□□□ 0.15
HCFC1-204ENST00000461098 TNRC18O15417 2968 aaPredicted RBP15.99■□□□□ 0.15
HCFC1-204ENST00000461098 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
HCFC1-204ENST00000461098 HLFQ16534 295 aa15.98■□□□□ 0.15
HCFC1-204ENST00000461098 CRY2Q49AN0 593 aa15.98■□□□□ 0.15
HCFC1-204ENST00000461098 CST9Q5W186 159 aa15.98■□□□□ 0.15
HCFC1-204ENST00000461098 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
HCFC1-204ENST00000461098 ALDH1B1P30837 517 aa15.97■□□□□ 0.15
HCFC1-204ENST00000461098 EPS15P42566 896 aa15.97■□□□□ 0.15
HCFC1-204ENST00000461098 SCNN1DP51172 638 aa15.97■□□□□ 0.15
HCFC1-204ENST00000461098 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
HCFC1-204ENST00000461098 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
HCFC1-204ENST00000461098 SNRPA1P09661 255 aaKnown RBP15.96■□□□□ 0.15
HCFC1-204ENST00000461098 CYP4F22Q6NT55 531 aa15.96■□□□□ 0.15
HCFC1-204ENST00000461098 CAPNS2Q96L46 248 aa15.96■□□□□ 0.15
HCFC1-204ENST00000461098 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
HCFC1-204ENST00000461098 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
HCFC1-204ENST00000461098 TRPM7Q96QT4 1865 aa15.95■□□□□ 0.14
HCFC1-204ENST00000461098 GPR101Q96P66 508 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-204ENST00000461098 CCDC85CA6NKD9 419 aa15.94■□□□□ 0.14
HCFC1-204ENST00000461098 TRAF5O00463 557 aa15.94■□□□□ 0.14
HCFC1-204ENST00000461098 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
HCFC1-204ENST00000461098 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms