RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SPAG9O60271 1321 aaKnown RBP7.25□□□□□ -1.25
SF3A3-202ENST00000460925 KIF15Q9NS87 1388 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
SF3A3-202ENST00000460925 BACH1O14867 736 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 ICMTO60725 284 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 FSHRP23945 695 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 RBM25P49756 843 aaKnown RBP7.24□□□□□ -1.25
SF3A3-202ENST00000460925 RAB15P59190 212 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 NR5A1Q13285 461 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 SLC4A9Q96Q91 983 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
SF3A3-202ENST00000460925 NAIPQ13075 1403 aa7.24□□□□□ -1.25
SF3A3-202ENST00000460925 FOXO3O43524 673 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 LILRA1O75019 489 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 ADH1CP00326 375 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 EPHA4P54764 986 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 GDF10P55107 478 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 FKBP5Q13451 457 aaPredicted RBP7.23□□□□□ -1.25
SF3A3-202ENST00000460925 IFFO2Q5TF58 517 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 LIAT1Q6ZQX7 453 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 GAS2L2Q8NHY3 880 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 ZNF428Q96B54 188 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 NCOA1Q15788 1441 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 MLH3Q9UHC1 1453 aa7.23□□□□□ -1.25
SF3A3-202ENST00000460925 CEP152O94986 1710 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 HFM1A2PYH4 1435 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 WNT7AO00755 349 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 GNRH1P01148 92 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 INHAP05111 366 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
SF3A3-202ENST00000460925 ARID5BQ14865 1188 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
SF3A3-202ENST00000460925 CYP2U1Q7Z449 544 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 CCDC116Q8IYX3 515 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 ZNF784Q8NCA9 323 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-202ENST00000460925 EMID1Q96A84 441 aaPredicted RBP7.22□□□□□ -1.25
SF3A3-202ENST00000460925 TMPRSS4Q9NRS4 437 aa7.22□□□□□ -1.25
SF3A3-202ENST00000460925 ANKRD30AQ9BXX3 1397 aa7.21□□□□□ -1.25
SF3A3-202ENST00000460925 RTEL1-TNFRSF6BF6WH68 1400 aa7.21□□□□□ -1.25
SF3A3-202ENST00000460925 MROH1Q8NDA8 1641 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 E9PSI1 815 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 C21orf2O43822 256 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 TSPY4P0CV99 314 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 TSPY10P0CW01 314 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 MARSP56192 900 aaKnown RBP7.21□□□□□ -1.26
SF3A3-202ENST00000460925 ECM1Q16610 540 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 PPP1R26Q5T8A7 1209 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-202ENST00000460925 GTF3C2Q8WUA4 911 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-202ENST00000460925 CYLDQ9NQC7 956 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 SEPT3Q9UH03 358 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 A2MP01023 1474 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 DUOX2Q9NRD8 1548 aa7.21□□□□□ -1.26
SF3A3-202ENST00000460925 ROCK1Q13464 1354 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 RAB3GAP2Q9H2M9 1393 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 FOXK2Q01167 660 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
SF3A3-202ENST00000460925 ESCO1Q5FWF5 840 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 SPNS2Q8IVW8 549 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 ETNK1Q9HBU6 452 aa7.2□□□□□ -1.26
SF3A3-202ENST00000460925 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-202ENST00000460925 RNF17Q9BXT8 1623 aaKnown RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 EIF2AK4Q9P2K8 1649 aaKnown RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 SETD5Q9C0A6 1442 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 ANKRD50Q9ULJ7 1429 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 CFAP65Q6ZU64 1925 aaKnown RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 H3BRB1 525 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 ABL1P00519 1130 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 NPR3P17342 541 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 MTFR1Q15390 333 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 GLYCTKQ8IVS8 523 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 HELQQ8TDG4 1101 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 BIN2Q9UBW5 565 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-202ENST00000460925 EMILIN1Q9Y6C2 1016 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 UNC13BO14795 1591 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 DEPDC5O75140 1603 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 ATAD2Q6PL18 1390 aa7.19□□□□□ -1.26
SF3A3-202ENST00000460925 BCORL1Q5H9F3 1711 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 ATP10AO60312 1499 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 MAGI2Q86UL8 1455 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 REREQ9P2R6 1566 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 LGR5O75473 907 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 NR3C2P08235 984 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 ADD1P35611 737 aaKnown RBP7.18□□□□□ -1.26
SF3A3-202ENST00000460925 ZNF211Q13398 564 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-202ENST00000460925 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 CAPN12Q6ZSI9 719 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 MRGPRX2Q96LB1 330 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 ERBINQ96RT1 1412 aa7.18□□□□□ -1.26
SF3A3-202ENST00000460925 CLTCQ00610 1675 aaKnown RBP7.17□□□□□ -1.26
SF3A3-202ENST00000460925 SLC19A1P41440 591 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 MLECQ14165 292 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
SF3A3-202ENST00000460925 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms