RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PDE6BP35913 854 aa24.81■■□□□ 1.56
COL5A1-203ENST00000460264 ERBB4Q15303 1308 aa24.81■■□□□ 1.56
COL5A1-203ENST00000460264 ARFGEF2Q9Y6D5 1785 aa24.8■■□□□ 1.56
COL5A1-203ENST00000460264 TTLL6Q8N841 843 aa24.8■■□□□ 1.56
COL5A1-203ENST00000460264 ZNF526Q8TF50 670 aaPredicted RBP24.8■■□□□ 1.56
COL5A1-203ENST00000460264 GPBP1L1Q9HC44 474 aaPredicted RBP24.8■■□□□ 1.56
COL5A1-203ENST00000460264 PDZRN3Q9UPQ7 1066 aa24.8■■□□□ 1.56
COL5A1-203ENST00000460264 NPHP1O15259 732 aa24.79■■□□□ 1.56
COL5A1-203ENST00000460264 C1QTNF8P60827 252 aa24.79■■□□□ 1.56
COL5A1-203ENST00000460264 ST5P78524 1137 aa24.79■■□□□ 1.56
COL5A1-203ENST00000460264 HLFQ16534 295 aa24.79■■□□□ 1.56
COL5A1-203ENST00000460264 NBPF5PQ86XG9 351 aaPredicted RBP24.79■■□□□ 1.56
COL5A1-203ENST00000460264 NGEFQ8N5V2 710 aa24.79■■□□□ 1.56
COL5A1-203ENST00000460264 NIP7Q9Y221 180 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL5A1-203ENST00000460264 MYL6BP14649 208 aa24.78■■□□□ 1.56
COL5A1-203ENST00000460264 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
COL5A1-203ENST00000460264 CHL1O00533 1208 aa24.77■■□□□ 1.56
COL5A1-203ENST00000460264 TTLL7Q6ZT98 887 aa24.77■■□□□ 1.56
COL5A1-203ENST00000460264 MAP3K15Q6ZN16 1313 aa24.77■■□□□ 1.56
COL5A1-203ENST00000460264 ERVV-1B6SEH8 477 aa24.76■■□□□ 1.55
COL5A1-203ENST00000460264 C9orf131Q5VYM1 1079 aa24.76■■□□□ 1.55
COL5A1-203ENST00000460264 KIF6Q6ZMV9 814 aa24.76■■□□□ 1.55
COL5A1-203ENST00000460264 SLX4Q8IY92 1834 aa24.75■■□□□ 1.55
COL5A1-203ENST00000460264 CCDC88AQ3V6T2 1871 aa24.75■■□□□ 1.55
COL5A1-203ENST00000460264 ZNF622Q969S3 477 aaKnown RBP eCLIP24.75■■□□□ 1.55
COL5A1-203ENST00000460264 EIF2S2P20042 333 aaKnown RBP24.74■■□□□ 1.55
COL5A1-203ENST00000460264 LRP10Q7Z4F1 713 aa24.74■■□□□ 1.55
COL5A1-203ENST00000460264 LAS1LQ9Y4W2 734 aaKnown RBP24.74■■□□□ 1.55
COL5A1-203ENST00000460264 TNRC6CQ9HCJ0 1690 aaKnown RBP24.74■■□□□ 1.55
COL5A1-203ENST00000460264 FER1L6Q2WGJ9 1857 aa24.74■■□□□ 1.55
COL5A1-203ENST00000460264 RASSF7Q02833 373 aa24.73■■□□□ 1.55
COL5A1-203ENST00000460264 PDIA6Q15084 440 aa24.73■■□□□ 1.55
COL5A1-203ENST00000460264 CCDC184Q52MB2 194 aa24.73■■□□□ 1.55
COL5A1-203ENST00000460264 TIAM2Q8IVF5 1701 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 APAF1O14727 1248 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 SRGNP10124 158 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 KRT24Q2M2I5 525 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 TPTE2Q6XPS3 522 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 ZBTB3Q9H5J0 574 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 RNF181Q9P0P0 153 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 ANKRD36CQ5JPF3 1778 aa24.72■■□□□ 1.55
COL5A1-203ENST00000460264 FAM177BA6PVY3 158 aa24.71■■□□□ 1.55
COL5A1-203ENST00000460264 PROSER3Q2NL68 480 aa24.71■■□□□ 1.55
COL5A1-203ENST00000460264 STYK1Q6J9G0 422 aa24.71■■□□□ 1.55
COL5A1-203ENST00000460264 CFAP44Q96MT7 982 aa24.7■■□□□ 1.54
COL5A1-203ENST00000460264 IBTKQ9P2D0 1353 aaPredicted RBP24.69■■□□□ 1.54
COL5A1-203ENST00000460264 ANXA1P04083 346 aa24.69■■□□□ 1.54
COL5A1-203ENST00000460264 CNKSR1Q969H4 720 aa24.69■■□□□ 1.54
COL5A1-203ENST00000460264 MASTLQ96GX5 879 aa24.69■■□□□ 1.54
COL5A1-203ENST00000460264 ABCC12Q96J65 1359 aa24.68■■□□□ 1.54
COL5A1-203ENST00000460264 UBN2Q6ZU65 1347 aa24.68■■□□□ 1.54
COL5A1-203ENST00000460264 KLRG2A4D1S0 409 aaPredicted RBP24.68■■□□□ 1.54
COL5A1-203ENST00000460264 NFKBIEO00221 500 aa24.68■■□□□ 1.54
COL5A1-203ENST00000460264 PRPF40BQ6NWY9 871 aaKnown RBP24.68■■□□□ 1.54
COL5A1-203ENST00000460264 GIGYF2Q6Y7W6 1299 aaKnown RBP24.68■■□□□ 1.54
COL5A1-203ENST00000460264 NECTIN2Q92692 538 aa24.68■■□□□ 1.54
COL5A1-203ENST00000460264 DICER1Q9UPY3 1922 aaKnown RBP24.68■■□□□ 1.54
COL5A1-203ENST00000460264 C21orf2O43822 256 aa24.67■■□□□ 1.54
COL5A1-203ENST00000460264 GPTP24298 496 aa24.67■■□□□ 1.54
COL5A1-203ENST00000460264 PRELPP51888 382 aa24.67■■□□□ 1.54
COL5A1-203ENST00000460264 NYXQ9GZU5 481 aa24.67■■□□□ 1.54
COL5A1-203ENST00000460264 KIF3CO14782 793 aa24.66■■□□□ 1.54
COL5A1-203ENST00000460264 ZNF853P0CG23 659 aa24.66■■□□□ 1.54
COL5A1-203ENST00000460264 LMNB1P20700 586 aa24.66■■□□□ 1.54
COL5A1-203ENST00000460264 MBIPQ9NS73 344 aa24.66■■□□□ 1.54
COL5A1-203ENST00000460264 ZNF219Q9P2Y4 722 aaPredicted RBP24.66■■□□□ 1.54
COL5A1-203ENST00000460264 RIC1Q4ADV7 1423 aa24.66■■□□□ 1.54
COL5A1-203ENST00000460264 HOXB7P09629 217 aa24.65■■□□□ 1.54
COL5A1-203ENST00000460264 NPR1P16066 1061 aa24.65■■□□□ 1.54
COL5A1-203ENST00000460264 GTF2E1P29083 439 aaPredicted RBP24.65■■□□□ 1.54
COL5A1-203ENST00000460264 ZNF34Q8IZ26 560 aa24.65■■□□□ 1.54
COL5A1-203ENST00000460264 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
COL5A1-203ENST00000460264 ANP32CO43423 234 aa24.64■■□□□ 1.54
COL5A1-203ENST00000460264 CALD1Q05682 793 aaKnown RBP24.64■■□□□ 1.54
COL5A1-203ENST00000460264 NUTM1Q86Y26 1132 aa24.64■■□□□ 1.54
COL5A1-203ENST00000460264 IFT57Q9NWB7 429 aa24.64■■□□□ 1.54
COL5A1-203ENST00000460264 ZC3H4Q9UPT8 1303 aaKnown RBP24.63■■□□□ 1.53
COL5A1-203ENST00000460264 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 ERFEQ4G0M1 354 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 HDGFL1Q5TGJ6 251 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 COPS6Q7L5N1 327 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 XAGE3Q8WTP9 111 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 NMRK2Q9NPI5 230 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 CHPF2Q9P2E5 772 aa24.63■■□□□ 1.53
COL5A1-203ENST00000460264 SUSD4Q5VX71 490 aa24.62■■□□□ 1.53
COL5A1-203ENST00000460264 LTBP3Q9NS15 1303 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 NTSR2O95665 410 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 GNAI1P63096 354 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 CRY2Q49AN0 593 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 DUSP27Q5VZP5 1158 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 MRS2Q9HD23 443 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 KDM2BQ8NHM5 1336 aa24.61■■□□□ 1.53
COL5A1-203ENST00000460264 AIMP1Q12904 312 aaKnown RBP24.6■■□□□ 1.53
COL5A1-203ENST00000460264 PARP10Q53GL7 1025 aa24.6■■□□□ 1.53
COL5A1-203ENST00000460264 SOGA3Q5TF21 947 aa24.6■■□□□ 1.53
COL5A1-203ENST00000460264 C7orf43Q8WVR3 580 aa24.6■■□□□ 1.53
COL5A1-203ENST00000460264 TAOK3Q9H2K8 898 aa24.59■■□□□ 1.53
COL5A1-203ENST00000460264 LAMB2P55268 1798 aa24.59■■□□□ 1.53
COL5A1-203ENST00000460264 PPP1R42Q7Z4L9 355 aa24.58■■□□□ 1.53
COL5A1-203ENST00000460264 DBF4Q9UBU7 674 aaPredicted RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms