RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 LAMB2P55268 1798 aa16.58■□□□□ 0.24
COL18A1-206ENST00000459895 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
COL18A1-206ENST00000459895 TTLL7Q6ZT98 887 aa16.57■□□□□ 0.24
COL18A1-206ENST00000459895 ZPR1O75312 459 aa16.56■□□□□ 0.24
COL18A1-206ENST00000459895 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL18A1-206ENST00000459895 BRCA1P38398 1863 aaKnown RBP16.55■□□□□ 0.24
COL18A1-206ENST00000459895 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
COL18A1-206ENST00000459895 MMP10P09238 476 aa16.55■□□□□ 0.24
COL18A1-206ENST00000459895 DDR1Q08345 913 aa16.55■□□□□ 0.24
COL18A1-206ENST00000459895 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
COL18A1-206ENST00000459895 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 POLD1P28340 1107 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
COL18A1-206ENST00000459895 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
COL18A1-206ENST00000459895 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 ARXQ96QS3 562 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
COL18A1-206ENST00000459895 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
COL18A1-206ENST00000459895 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
COL18A1-206ENST00000459895 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
COL18A1-206ENST00000459895 VAMP4O75379 141 aa16.52■□□□□ 0.24
COL18A1-206ENST00000459895 NFIXQ14938 502 aa16.52■□□□□ 0.24
COL18A1-206ENST00000459895 HLFQ16534 295 aa16.52■□□□□ 0.24
COL18A1-206ENST00000459895 CACNA1SQ13698 1873 aa16.51■□□□□ 0.23
COL18A1-206ENST00000459895 PXDNLA1KZ92 1463 aa16.51■□□□□ 0.23
COL18A1-206ENST00000459895 POLRMTO00411 1230 aaKnown RBP16.51■□□□□ 0.23
COL18A1-206ENST00000459895 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
COL18A1-206ENST00000459895 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
COL18A1-206ENST00000459895 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
COL18A1-206ENST00000459895 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
COL18A1-206ENST00000459895 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-206ENST00000459895 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
COL18A1-206ENST00000459895 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
COL18A1-206ENST00000459895 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
COL18A1-206ENST00000459895 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
COL18A1-206ENST00000459895 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
COL18A1-206ENST00000459895 ADCY9O60503 1353 aa16.5■□□□□ 0.23
COL18A1-206ENST00000459895 RGL2O15211 777 aa16.49■□□□□ 0.23
COL18A1-206ENST00000459895 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-206ENST00000459895 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
COL18A1-206ENST00000459895 TM4SF1P30408 202 aa16.48■□□□□ 0.23
COL18A1-206ENST00000459895 G2E3Q7L622 706 aa16.48■□□□□ 0.23
COL18A1-206ENST00000459895 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
COL18A1-206ENST00000459895 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
COL18A1-206ENST00000459895 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
COL18A1-206ENST00000459895 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
COL18A1-206ENST00000459895 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
COL18A1-206ENST00000459895 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
COL18A1-206ENST00000459895 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
COL18A1-206ENST00000459895 GPTP24298 496 aa16.46■□□□□ 0.23
COL18A1-206ENST00000459895 FLIIQ13045 1269 aa16.46■□□□□ 0.23
COL18A1-206ENST00000459895 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
COL18A1-206ENST00000459895 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
COL18A1-206ENST00000459895 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
COL18A1-206ENST00000459895 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
COL18A1-206ENST00000459895 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
COL18A1-206ENST00000459895 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
COL18A1-206ENST00000459895 SERPINB2P05120 415 aa16.44■□□□□ 0.22
COL18A1-206ENST00000459895 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
COL18A1-206ENST00000459895 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
COL18A1-206ENST00000459895 RIC1Q4ADV7 1423 aa16.44■□□□□ 0.22
COL18A1-206ENST00000459895 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-206ENST00000459895 ANKRD13DQ6ZTN6 518 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 ZNF34Q8IZ26 560 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 MYH3P11055 1940 aa16.43■□□□□ 0.22
COL18A1-206ENST00000459895 FAM177BA6PVY3 158 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 NTSR2O95665 410 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
COL18A1-206ENST00000459895 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-206ENST00000459895 NBPF5PQ86XG9 351 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-206ENST00000459895 CCDC24Q8N4L8 307 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 MRPL50Q8N5N7 158 aaKnown RBP16.42■□□□□ 0.22
COL18A1-206ENST00000459895 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
COL18A1-206ENST00000459895 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
COL18A1-206ENST00000459895 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
COL18A1-206ENST00000459895 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
COL18A1-206ENST00000459895 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
COL18A1-206ENST00000459895 COL4A1P02462 1669 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 MYD88Q99836 296 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
COL18A1-206ENST00000459895 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
COL18A1-206ENST00000459895 PARP10Q53GL7 1025 aa16.39■□□□□ 0.21
COL18A1-206ENST00000459895 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
COL18A1-206ENST00000459895 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
COL18A1-206ENST00000459895 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms