RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 RGS12O14924 1447 aa16.4■□□□□ 0.22
TOP3B-213ENST00000457179 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
TOP3B-213ENST00000457179 CHD2O14647 1828 aaKnown RBP16.4■□□□□ 0.22
TOP3B-213ENST00000457179 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.22
TOP3B-213ENST00000457179 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-213ENST00000457179 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-213ENST00000457179 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 TPRNQ4KMQ1 711 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
TOP3B-213ENST00000457179 ZNF496Q96IT1 587 aaPredicted RBP16.39■□□□□ 0.21
TOP3B-213ENST00000457179 PXDNQ92626 1479 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 ZBTB22O15209 634 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 GNAI3P08754 354 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 RIC3Q7Z5B4 369 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 SIL1Q9H173 461 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 CGNQ9P2M7 1197 aaKnown RBP16.38■□□□□ 0.21
TOP3B-213ENST00000457179 NSFL1CQ9UNZ2 370 aaKnown RBP16.38■□□□□ 0.21
TOP3B-213ENST00000457179 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-213ENST00000457179 KIF20AO95235 890 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 CABP4P57796 275 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 USP16Q9Y5T5 823 aa16.38■□□□□ 0.21
TOP3B-213ENST00000457179 CYP27B1O15528 508 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-213ENST00000457179 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 LETM1O95202 739 aaPredicted RBP16.37■□□□□ 0.21
TOP3B-213ENST00000457179 NUCB2P80303 420 aa16.37■□□□□ 0.21
TOP3B-213ENST00000457179 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
TOP3B-213ENST00000457179 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
TOP3B-213ENST00000457179 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
TOP3B-213ENST00000457179 CLEC17AQ6ZS10 378 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
TOP3B-213ENST00000457179 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 ADAMTS2O95450 1211 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-213ENST00000457179 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-213ENST00000457179 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 KIF3AQ9Y496 699 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 MST1RQ04912 1400 aa16.35■□□□□ 0.21
TOP3B-213ENST00000457179 PHKG2P15735 406 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-213ENST00000457179 USP26Q9BXU7 913 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 PIP4K2BP78356 416 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
TOP3B-213ENST00000457179 TTC12Q9H892 705 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-213ENST00000457179 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
TOP3B-213ENST00000457179 PDE1AP54750 535 aa16.33■□□□□ 0.21
TOP3B-213ENST00000457179 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.21
TOP3B-213ENST00000457179 TMEM51Q9NW97 253 aa16.33■□□□□ 0.21
TOP3B-213ENST00000457179 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
TOP3B-213ENST00000457179 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
TOP3B-213ENST00000457179 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-213ENST00000457179 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-213ENST00000457179 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-213ENST00000457179 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
TOP3B-213ENST00000457179 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
TOP3B-213ENST00000457179 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
TOP3B-213ENST00000457179 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
TOP3B-213ENST00000457179 CDK11BP21127 795 aaKnown RBP16.32■□□□□ 0.2
TOP3B-213ENST00000457179 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
TOP3B-213ENST00000457179 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
TOP3B-213ENST00000457179 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
TOP3B-213ENST00000457179 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
TOP3B-213ENST00000457179 MYD88Q99836 296 aa16.31■□□□□ 0.2
TOP3B-213ENST00000457179 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
TOP3B-213ENST00000457179 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
TOP3B-213ENST00000457179 NFAT5O94916 1531 aa16.31■□□□□ 0.2
TOP3B-213ENST00000457179 RABEP1Q15276 862 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-213ENST00000457179 LTN1O94822 1766 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 MX1P20591 662 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
TOP3B-213ENST00000457179 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
TOP3B-213ENST00000457179 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
TOP3B-213ENST00000457179 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
TOP3B-213ENST00000457179 ZCRB1Q8TBF4 217 aaKnown RBP16.29■□□□□ 0.2
TOP3B-213ENST00000457179 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-213ENST00000457179 ERC2O15083 957 aa16.28■□□□□ 0.2
TOP3B-213ENST00000457179 NEK4P51957 841 aa16.28■□□□□ 0.2
TOP3B-213ENST00000457179 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
TOP3B-213ENST00000457179 A1BGP04217 495 aa16.28■□□□□ 0.2
TOP3B-213ENST00000457179 RGPD1P0DJD0 1748 aa16.28■□□□□ 0.2
TOP3B-213ENST00000457179 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-213ENST00000457179 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
TOP3B-213ENST00000457179 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
TOP3B-213ENST00000457179 DTNBO60941 627 aa16.27■□□□□ 0.2
TOP3B-213ENST00000457179 REC8O95072 547 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms