RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 NPR1P16066 1061 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 ALDH1B1P30837 517 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
PKP4-207ENST00000457109 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
PKP4-207ENST00000457109 NFE2L2Q16236 605 aa11.62□□□□□ -0.55
PKP4-207ENST00000457109 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
PKP4-207ENST00000457109 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
PKP4-207ENST00000457109 NFKBIEO00221 500 aa11.61□□□□□ -0.55
PKP4-207ENST00000457109 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
PKP4-207ENST00000457109 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
PKP4-207ENST00000457109 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
PKP4-207ENST00000457109 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 ERVV-1B6SEH8 477 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 MYL6BP14649 208 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 RALBP1Q15311 655 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
PKP4-207ENST00000457109 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 KLRG1Q96E93 195 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
PKP4-207ENST00000457109 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
PKP4-207ENST00000457109 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
PKP4-207ENST00000457109 TSPYL4Q9UJ04 414 aa11.59□□□□□ -0.55
PKP4-207ENST00000457109 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
PKP4-207ENST00000457109 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
PKP4-207ENST00000457109 RIPK4P57078 832 aa11.58□□□□□ -0.56
PKP4-207ENST00000457109 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
PKP4-207ENST00000457109 HLFQ16534 295 aa11.58□□□□□ -0.56
PKP4-207ENST00000457109 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
PKP4-207ENST00000457109 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
PKP4-207ENST00000457109 DDNO94850 711 aaPredicted RBP11.57□□□□□ -0.56
PKP4-207ENST00000457109 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
PKP4-207ENST00000457109 PRELPP51888 382 aa11.57□□□□□ -0.56
PKP4-207ENST00000457109 HTRA3P83110 453 aa11.57□□□□□ -0.56
PKP4-207ENST00000457109 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
PKP4-207ENST00000457109 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
PKP4-207ENST00000457109 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
PKP4-207ENST00000457109 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
PKP4-207ENST00000457109 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
PKP4-207ENST00000457109 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
PKP4-207ENST00000457109 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 RBM17Q96I25 401 aaKnown RBP11.56□□□□□ -0.56
PKP4-207ENST00000457109 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
PKP4-207ENST00000457109 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 BABAM1Q9NWV8 329 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
PKP4-207ENST00000457109 GPTP24298 496 aa11.55□□□□□ -0.56
PKP4-207ENST00000457109 SYNE4Q8N205 404 aa11.55□□□□□ -0.56
PKP4-207ENST00000457109 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
PKP4-207ENST00000457109 ERBB4Q15303 1308 aa11.55□□□□□ -0.56
PKP4-207ENST00000457109 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
PKP4-207ENST00000457109 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
PKP4-207ENST00000457109 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 PARP10Q53GL7 1025 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 NUTM1Q86Y26 1132 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
PKP4-207ENST00000457109 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
PKP4-207ENST00000457109 NRXN2Q9P2S2 1712 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 POTECB2RU33 542 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 IARSP41252 1262 aaKnown RBP11.53□□□□□ -0.56
PKP4-207ENST00000457109 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
PKP4-207ENST00000457109 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
PKP4-207ENST00000457109 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
PKP4-207ENST00000457109 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 JMYQ8N9B5 988 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
PKP4-207ENST00000457109 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
PKP4-207ENST00000457109 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
PKP4-207ENST00000457109 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
PKP4-207ENST00000457109 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
PKP4-207ENST00000457109 PSMD1Q99460 953 aa11.52□□□□□ -0.57
PKP4-207ENST00000457109 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
PKP4-207ENST00000457109 BRCA1P38398 1863 aaKnown RBP11.52□□□□□ -0.57
PKP4-207ENST00000457109 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
PKP4-207ENST00000457109 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
PKP4-207ENST00000457109 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 ZNF34Q8IZ26 560 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
PKP4-207ENST00000457109 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 TAF1DQ9H5J8 278 aaPredicted RBP11.51□□□□□ -0.57
PKP4-207ENST00000457109 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 GJA3Q9Y6H8 435 aa11.51□□□□□ -0.57
PKP4-207ENST00000457109 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
PKP4-207ENST00000457109 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
PKP4-207ENST00000457109 HOXA10P31260 410 aaPredicted RBP11.5□□□□□ -0.57
PKP4-207ENST00000457109 EPHX2P34913 555 aa11.5□□□□□ -0.57
PKP4-207ENST00000457109 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
PKP4-207ENST00000457109 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
PKP4-207ENST00000457109 GPC2Q8N158 579 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms