RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
TIMP1-205ENST00000456754 PTGER2P43116 358 aa18.08■□□□□ 0.48
TIMP1-205ENST00000456754 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.48
TIMP1-205ENST00000456754 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
TIMP1-205ENST00000456754 MTFR1LQ9H019 292 aa18.08■□□□□ 0.48
TIMP1-205ENST00000456754 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
TIMP1-205ENST00000456754 MAP3K15Q6ZN16 1313 aa18.07■□□□□ 0.48
TIMP1-205ENST00000456754 DDR1Q08345 913 aa18.07■□□□□ 0.48
TIMP1-205ENST00000456754 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
TIMP1-205ENST00000456754 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
TIMP1-205ENST00000456754 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
TIMP1-205ENST00000456754 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
TIMP1-205ENST00000456754 NFIXQ14938 502 aa18.06■□□□□ 0.48
TIMP1-205ENST00000456754 KIF6Q6ZMV9 814 aa18.06■□□□□ 0.48
TIMP1-205ENST00000456754 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
TIMP1-205ENST00000456754 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
TIMP1-205ENST00000456754 SLC16A10Q8TF71 515 aa18.06■□□□□ 0.48
TIMP1-205ENST00000456754 MMP10P09238 476 aa18.05■□□□□ 0.48
TIMP1-205ENST00000456754 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
TIMP1-205ENST00000456754 ADCY9O60503 1353 aa18.04■□□□□ 0.48
TIMP1-205ENST00000456754 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
TIMP1-205ENST00000456754 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
TIMP1-205ENST00000456754 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
TIMP1-205ENST00000456754 BCAR3O75815 825 aa18.03■□□□□ 0.48
TIMP1-205ENST00000456754 GPTP24298 496 aa18.03■□□□□ 0.48
TIMP1-205ENST00000456754 TM4SF1P30408 202 aa18.03■□□□□ 0.48
TIMP1-205ENST00000456754 FLIIQ13045 1269 aa18.03■□□□□ 0.48
TIMP1-205ENST00000456754 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
TIMP1-205ENST00000456754 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 F6X3S4 739 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
TIMP1-205ENST00000456754 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
TIMP1-205ENST00000456754 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
TIMP1-205ENST00000456754 POLRMTO00411 1230 aaKnown RBP18.01■□□□□ 0.47
TIMP1-205ENST00000456754 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
TIMP1-205ENST00000456754 MAP3K2Q9Y2U5 619 aa18.01■□□□□ 0.47
TIMP1-205ENST00000456754 LRP5O75197 1615 aa18.01■□□□□ 0.47
TIMP1-205ENST00000456754 PI4KAP2A4QPH2 592 aa18■□□□□ 0.47
TIMP1-205ENST00000456754 ATP5J2-PTCD1G3V325 749 aa18■□□□□ 0.47
TIMP1-205ENST00000456754 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
TIMP1-205ENST00000456754 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
TIMP1-205ENST00000456754 PI4KAP1Q8N8J0 262 aa18■□□□□ 0.47
TIMP1-205ENST00000456754 TNNQ9UQP3 1299 aa18■□□□□ 0.47
TIMP1-205ENST00000456754 NIP7Q9Y221 180 aaKnown RBP eCLIP18■□□□□ 0.47
TIMP1-205ENST00000456754 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
TIMP1-205ENST00000456754 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
TIMP1-205ENST00000456754 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
TIMP1-205ENST00000456754 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
TIMP1-205ENST00000456754 MYD88Q99836 296 aa17.99■□□□□ 0.47
TIMP1-205ENST00000456754 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
TIMP1-205ENST00000456754 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 POLD1P28340 1107 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
TIMP1-205ENST00000456754 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 SRCAPQ6ZRS2 3230 aa17.98■□□□□ 0.47
TIMP1-205ENST00000456754 SERPINB2P05120 415 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 SUSD4Q5VX71 490 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
TIMP1-205ENST00000456754 SYNE4Q8N205 404 aa17.96■□□□□ 0.47
TIMP1-205ENST00000456754 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
TIMP1-205ENST00000456754 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
TIMP1-205ENST00000456754 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
TIMP1-205ENST00000456754 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
TIMP1-205ENST00000456754 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
TIMP1-205ENST00000456754 CWF19L2Q2TBE0 894 aaKnown RBP17.95■□□□□ 0.46
TIMP1-205ENST00000456754 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
TIMP1-205ENST00000456754 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
TIMP1-205ENST00000456754 PPP1R1BQ9UD71 204 aaPredicted RBP17.95■□□□□ 0.46
TIMP1-205ENST00000456754 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
TIMP1-205ENST00000456754 TNRC6CQ9HCJ0 1690 aaKnown RBP17.94■□□□□ 0.46
TIMP1-205ENST00000456754 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
TIMP1-205ENST00000456754 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
TIMP1-205ENST00000456754 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 C10orf71Q711Q0 1435 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 RGL2O15211 777 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 NTSR2O95665 410 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
TIMP1-205ENST00000456754 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
TIMP1-205ENST00000456754 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
TIMP1-205ENST00000456754 FHDC1Q9C0D6 1143 aaPredicted RBP17.93■□□□□ 0.46
TIMP1-205ENST00000456754 RCAN3Q9UKA8 241 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 N4BP2Q86UW6 1770 aaPredicted RBP17.93■□□□□ 0.46
TIMP1-205ENST00000456754 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
TIMP1-205ENST00000456754 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
TIMP1-205ENST00000456754 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
TIMP1-205ENST00000456754 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
TIMP1-205ENST00000456754 NLGN2Q8NFZ4 835 aa17.92■□□□□ 0.46
TIMP1-205ENST00000456754 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
TIMP1-205ENST00000456754 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
TIMP1-205ENST00000456754 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms