RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 NEURL1BA8MQ27 555 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 HMMRO75330 724 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 NUCB1Q02818 461 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 NUP188Q5SRE5 1749 aa20.2■□□□□ 0.82
TMEM220-202ENST00000455996 NBPF7P0C2Y1 421 aaPredicted RBP20.19■□□□□ 0.82
TMEM220-202ENST00000455996 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
TMEM220-202ENST00000455996 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
TMEM220-202ENST00000455996 LRRFIP2Q9Y608 721 aaKnown RBP20.19■□□□□ 0.82
TMEM220-202ENST00000455996 RREB1Q92766 1687 aa20.19■□□□□ 0.82
TMEM220-202ENST00000455996 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
TMEM220-202ENST00000455996 GRM8O00222 908 aa20.19■□□□□ 0.82
TMEM220-202ENST00000455996 MYD88Q99836 296 aa20.19■□□□□ 0.82
TMEM220-202ENST00000455996 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
TMEM220-202ENST00000455996 GCKRQ14397 625 aa20.18■□□□□ 0.82
TMEM220-202ENST00000455996 COL15A1P39059 1388 aa20.17■□□□□ 0.82
TMEM220-202ENST00000455996 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
TMEM220-202ENST00000455996 MTX1Q13505 466 aa20.17■□□□□ 0.82
TMEM220-202ENST00000455996 ITPK1Q13572 414 aa20.17■□□□□ 0.82
TMEM220-202ENST00000455996 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
TMEM220-202ENST00000455996 C9orf78Q9NZ63 289 aaPredicted RBP20.17■□□□□ 0.82
TMEM220-202ENST00000455996 RBM6P78332 1123 aaKnown RBP20.16■□□□□ 0.82
TMEM220-202ENST00000455996 CHD1LQ86WJ1 897 aa20.16■□□□□ 0.82
TMEM220-202ENST00000455996 SSH3Q8TE77 659 aa20.16■□□□□ 0.82
TMEM220-202ENST00000455996 ZBTB1Q9Y2K1 713 aa20.16■□□□□ 0.82
TMEM220-202ENST00000455996 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
TMEM220-202ENST00000455996 POLA2Q14181 598 aa20.15■□□□□ 0.82
TMEM220-202ENST00000455996 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
TMEM220-202ENST00000455996 PNMA6EA0A0J9YXQ4 647 aa20.14■□□□□ 0.81
TMEM220-202ENST00000455996 RGS3P49796 1198 aa20.14■□□□□ 0.81
TMEM220-202ENST00000455996 EIF5P55010 431 aaKnown RBP20.14■□□□□ 0.81
TMEM220-202ENST00000455996 PTF1AQ7RTS3 328 aa20.14■□□□□ 0.81
TMEM220-202ENST00000455996 BTAF1O14981 1849 aa20.14■□□□□ 0.81
TMEM220-202ENST00000455996 MAP3K15Q6ZN16 1313 aa20.14■□□□□ 0.81
TMEM220-202ENST00000455996 PDE4AP27815 886 aa20.13■□□□□ 0.81
TMEM220-202ENST00000455996 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
TMEM220-202ENST00000455996 KIF6Q6ZMV9 814 aa20.13■□□□□ 0.81
TMEM220-202ENST00000455996 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
TMEM220-202ENST00000455996 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
TMEM220-202ENST00000455996 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
TMEM220-202ENST00000455996 ERVV-1B6SEH8 477 aa20.12■□□□□ 0.81
TMEM220-202ENST00000455996 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
TMEM220-202ENST00000455996 CCDC191Q8NCU4 936 aa20.12■□□□□ 0.81
TMEM220-202ENST00000455996 KAZALD1Q96I82 304 aa20.12■□□□□ 0.81
TMEM220-202ENST00000455996 BCL11BQ9C0K0 894 aaPredicted RBP20.12■□□□□ 0.81
TMEM220-202ENST00000455996 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
TMEM220-202ENST00000455996 CASP7P55210 303 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 ANKRD45Q5TZF3 282 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 KRT27Q7Z3Y8 459 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 PPP1R42Q7Z4L9 355 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 SUCLG2Q96I99 432 aa20.11■□□□□ 0.81
TMEM220-202ENST00000455996 ATP5J2-PTCD1G3V325 749 aa20.1■□□□□ 0.81
TMEM220-202ENST00000455996 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
TMEM220-202ENST00000455996 FAM196AQ6ZSG2 479 aa20.1■□□□□ 0.81
TMEM220-202ENST00000455996 CWC25Q9NXE8 425 aaPredicted RBP20.1■□□□□ 0.81
TMEM220-202ENST00000455996 H7C1W4 665 aa20.1■□□□□ 0.81
TMEM220-202ENST00000455996 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
TMEM220-202ENST00000455996 LNPKQ9C0E8 428 aa20.1■□□□□ 0.81
TMEM220-202ENST00000455996 CNTNAP4Q9C0A0 1308 aa20.1■□□□□ 0.81
TMEM220-202ENST00000455996 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
TMEM220-202ENST00000455996 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
TMEM220-202ENST00000455996 AFDNP55196 1824 aaKnown RBP20.08■□□□□ 0.8
TMEM220-202ENST00000455996 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.8
TMEM220-202ENST00000455996 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.8
TMEM220-202ENST00000455996 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
TMEM220-202ENST00000455996 LY75O60449 1722 aa20.07■□□□□ 0.8
TMEM220-202ENST00000455996 A0A087WZG4 1122 aa20.07■□□□□ 0.8
TMEM220-202ENST00000455996 SRGAP3O43295 1099 aa20.07■□□□□ 0.8
TMEM220-202ENST00000455996 RABL6Q3YEC7 729 aaPredicted RBP20.07■□□□□ 0.8
TMEM220-202ENST00000455996 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
TMEM220-202ENST00000455996 BICC1Q9H694 974 aaKnown RBP20.07■□□□□ 0.8
TMEM220-202ENST00000455996 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
TMEM220-202ENST00000455996 RGL2O15211 777 aa20.06■□□□□ 0.8
TMEM220-202ENST00000455996 RAB11FIP3O75154 756 aa20.06■□□□□ 0.8
TMEM220-202ENST00000455996 BACH2Q9BYV9 841 aa20.06■□□□□ 0.8
TMEM220-202ENST00000455996 HLFQ16534 295 aa20.05■□□□□ 0.8
TMEM220-202ENST00000455996 UBE3BQ7Z3V4 1068 aa20.05■□□□□ 0.8
TMEM220-202ENST00000455996 RXRBP28702 533 aa20.04■□□□□ 0.8
TMEM220-202ENST00000455996 FAM161AQ3B820 660 aa20.04■□□□□ 0.8
TMEM220-202ENST00000455996 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
TMEM220-202ENST00000455996 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
TMEM220-202ENST00000455996 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
TMEM220-202ENST00000455996 HSP90AB4PQ58FF6 505 aa20.03■□□□□ 0.8
TMEM220-202ENST00000455996 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
TMEM220-202ENST00000455996 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
TMEM220-202ENST00000455996 EXOC6BQ9Y2D4 811 aa20.03■□□□□ 0.8
TMEM220-202ENST00000455996 PCCAP05165 728 aaPredicted RBP20.02■□□□□ 0.8
TMEM220-202ENST00000455996 C8orf34Q49A92 452 aa20.02■□□□□ 0.8
TMEM220-202ENST00000455996 NLRP10Q86W26 655 aa20.02■□□□□ 0.8
TMEM220-202ENST00000455996 ZNF34Q8IZ26 560 aa20.02■□□□□ 0.8
TMEM220-202ENST00000455996 LRRCC1Q9C099 1032 aa20.02■□□□□ 0.8
TMEM220-202ENST00000455996 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.8
TMEM220-202ENST00000455996 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
TMEM220-202ENST00000455996 FOXO4P98177 505 aa20.02■□□□□ 0.79
TMEM220-202ENST00000455996 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.79
TMEM220-202ENST00000455996 ANKRD36CQ5JPF3 1778 aa20.01■□□□□ 0.79
TMEM220-202ENST00000455996 RPS6KA4O75676 772 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms