RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 GCKRQ14397 625 aa18.61■□□□□ 0.57
GTF2IRD1-203ENST00000455841 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
GTF2IRD1-203ENST00000455841 LMTK3Q96Q04 1460 aa18.61■□□□□ 0.57
GTF2IRD1-203ENST00000455841 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
GTF2IRD1-203ENST00000455841 KIAA1211Q6ZU35 1233 aa18.6■□□□□ 0.57
GTF2IRD1-203ENST00000455841 DNAJC2Q99543 621 aaKnown RBP18.6■□□□□ 0.57
GTF2IRD1-203ENST00000455841 SLIT3O75094 1523 aa18.6■□□□□ 0.57
GTF2IRD1-203ENST00000455841 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
GTF2IRD1-203ENST00000455841 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 CHMLP26374 656 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 CPA1P15085 419 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 ALDH1L1O75891 902 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 CHAMP1Q96JM3 812 aa18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 METTL22Q9BUU2 404 aaPredicted RBP18.59■□□□□ 0.57
GTF2IRD1-203ENST00000455841 GSE1Q14687 1217 aa18.58■□□□□ 0.57
GTF2IRD1-203ENST00000455841 KAZALD1Q96I82 304 aa18.58■□□□□ 0.57
GTF2IRD1-203ENST00000455841 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.57
GTF2IRD1-203ENST00000455841 KCNQ4P56696 695 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 CNTROBQ8N137 903 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 ST18O60284 1047 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 RAB11FIP3O75154 756 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 MCCP23508 829 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 ANTXR1Q9H6X2 564 aa18.57■□□□□ 0.56
GTF2IRD1-203ENST00000455841 SSFA2P28290 1259 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TAF7LQ5H9L4 462 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
GTF2IRD1-203ENST00000455841 EXOC5O00471 708 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 POLA2Q14181 598 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 RABEP1Q15276 862 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 SASH1O94885 1247 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 CHGBP05060 677 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 PIGBQ92521 554 aa18.55■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TFCP2Q12800 502 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 NCAPD2Q15021 1401 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 PKP1Q13835 747 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
GTF2IRD1-203ENST00000455841 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
GTF2IRD1-203ENST00000455841 DCCP43146 1447 aa18.53■□□□□ 0.56
GTF2IRD1-203ENST00000455841 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TIMM10P62072 90 aa18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 TNPO1Q92973 898 aaKnown RBP18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 MCM4P33991 863 aa18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 PI4K2BQ8TCG2 481 aa18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 FAM227BQ96M60 508 aa18.52■□□□□ 0.56
GTF2IRD1-203ENST00000455841 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.55
GTF2IRD1-203ENST00000455841 SLFNL1Q499Z3 407 aa18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 SNRKQ9NRH2 765 aa18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
GTF2IRD1-203ENST00000455841 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 OSBPL3Q9H4L5 887 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 DBNDD2Q9BQY9 259 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 LRRC37A3O60309 1634 aa18.5■□□□□ 0.55
GTF2IRD1-203ENST00000455841 COL5A2P05997 1499 aaPredicted RBP18.49■□□□□ 0.55
GTF2IRD1-203ENST00000455841 KIF6Q6ZMV9 814 aa18.49■□□□□ 0.55
GTF2IRD1-203ENST00000455841 ERC1Q8IUD2 1116 aa18.49■□□□□ 0.55
GTF2IRD1-203ENST00000455841 BRPF3Q9ULD4 1205 aa18.49■□□□□ 0.55
GTF2IRD1-203ENST00000455841 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
GTF2IRD1-203ENST00000455841 CPDO75976 1380 aa18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 PUS3Q9BZE2 481 aaKnown RBP18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 SALL3Q9BXA9 1300 aa18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 ERVV-2B6SEH9 535 aa18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
GTF2IRD1-203ENST00000455841 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
GTF2IRD1-203ENST00000455841 SNX21Q969T3 373 aa18.47■□□□□ 0.55
GTF2IRD1-203ENST00000455841 PTH1RQ03431 593 aa18.47■□□□□ 0.55
GTF2IRD1-203ENST00000455841 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
GTF2IRD1-203ENST00000455841 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
GTF2IRD1-203ENST00000455841 TRAK2O60296 914 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms