RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-209ENST00000454591 PDIA6Q15084 440 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 HS1BP3Q53T59 392 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 TMEM87AQ8NBN3 555 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 GPT2Q8TD30 523 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 GPATCH3Q96I76 525 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 AXIN2Q9Y2T1 843 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
ECHDC1-209ENST00000454591 GRM8O00222 908 aa15.14■□□□□ 0.01
ECHDC1-209ENST00000454591 NASPP49321 788 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-209ENST00000454591 GLI3P10071 1580 aa15.14■□□□□ 0.01
ECHDC1-209ENST00000454591 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 WDR33Q9C0J8 1336 aaKnown RBP15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 ESPNB1AK53 854 aa15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 HIP1O00291 1037 aa15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 PROSER3Q2NL68 480 aa15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 EVI5LQ96CN4 794 aa15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
ECHDC1-209ENST00000454591 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 CAVIN1Q6NZI2 390 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 LARP1Q6PKG0 1096 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 KAZALD1Q96I82 304 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 PDLIM2Q96JY6 352 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 JCADQ9P266 1359 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 ANXA1P04083 346 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
ECHDC1-209ENST00000454591 RFX7Q2KHR2 1363 aa15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 PDIA4P13667 645 aaKnown RBP15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 ZSCAN31Q96LW9 406 aaPredicted RBP15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 SPG7Q9UQ90 795 aa15.11■□□□□ 0.01
ECHDC1-209ENST00000454591 ARFGEF2Q9Y6D5 1785 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 CPDO75976 1380 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 RPAP1Q9BWH6 1393 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 PHKG2P15735 406 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 ANP32BQ92688 251 aaKnown RBP15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 ARXQ96QS3 562 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 MEGF6O75095 1541 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 STRCP1A6NGW2 1772 aa15.1■□□□□ 0.01
ECHDC1-209ENST00000454591 TMEM94Q12767 1356 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 SASH1O94885 1247 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 IFIT2P09913 472 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 OS9Q13438 667 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 VPS53Q5VIR6 699 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 TICAM2Q86XR7 235 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 TRIM44Q96DX7 344 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 ZSWIM6Q9HCJ5 1215 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 SH2B1Q9NRF2 756 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 DIAPH3Q9NSV4 1193 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 TMEM63CQ9P1W3 806 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 AFDNP55196 1824 aaKnown RBP15.09■□□□□ 0.01
ECHDC1-209ENST00000454591 TATP17735 454 aaPredicted RBP15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 NECTIN1Q15223 517 aa15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 RASEFQ8IZ41 740 aa15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 SYAP1Q96A49 352 aaPredicted RBP15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 METTL22Q9BUU2 404 aaPredicted RBP15.08■□□□□ 0.01
ECHDC1-209ENST00000454591 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
ECHDC1-209ENST00000454591 ERBB4Q15303 1308 aa15.08■□□□□ 0
ECHDC1-209ENST00000454591 CCDC171Q6TFL3 1326 aa15.08■□□□□ 0
ECHDC1-209ENST00000454591 ZBTB7CA1YPR0 619 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 NEURL1BA8MQ27 555 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 RUFY3Q7L099 469 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 BICC1Q9H694 974 aaKnown RBP15.07■□□□□ 0
ECHDC1-209ENST00000454591 PAPPAQ13219 1627 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
ECHDC1-209ENST00000454591 AK2P54819 239 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 NEXNQ0ZGT2 675 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 G3BP1Q13283 466 aaKnown RBP eCLIP15.07■□□□□ 01e-11■■■□□ 15.6
ECHDC1-209ENST00000454591 GCKRQ14397 625 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
ECHDC1-209ENST00000454591 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
ECHDC1-209ENST00000454591 MAP4K1Q92918 833 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 DCAF5Q96JK2 942 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 RBSNQ9H1K0 784 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 COPRSQ9NQ92 184 aa15.07■□□□□ 0
ECHDC1-209ENST00000454591 MED23Q9ULK4 1368 aa15.06■□□□□ 0
ECHDC1-209ENST00000454591 ZSCAN22P10073 491 aaPredicted RBP15.06■□□□□ 0
ECHDC1-209ENST00000454591 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
ECHDC1-209ENST00000454591 XPCQ01831 940 aaPredicted RBP15.06■□□□□ 0
ECHDC1-209ENST00000454591 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
ECHDC1-209ENST00000454591 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
ECHDC1-209ENST00000454591 PA2G4Q9UQ80 394 aaKnown RBP15.06■□□□□ 0
ECHDC1-209ENST00000454591 TCHHQ07283 1943 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms